Nymphaea colorata (blue-petal water lily): 116248897
Help
Entry
116248897 CDS
T07418
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116248897
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116248897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
FLIC_barrel
NosD
Motif
Other DBs
NCBI-GeneID:
116248897
NCBI-ProteinID:
XP_031477786
LinkDB
All DBs
Position
2:7677738..7680551
Genome browser
AA seq
402 aa
AA seq
DB search
MANPSFFLFFFFLLVVTSSARAPPQDPELIVKELEREINGSRRELGYLSCGTGNPIDDCW
RCDPNWEANRQRLADCAYGFGKNALGGKNGKTYVVTDSGDDDPVNPKPGTLRYAVIQNEP
LWIIFARDMVIQLKEELIMNSYKTIDGRGASVHIANGPCITIQYVTNIIIHGVHIHDCKQ
GGNTYVRDSPEHYGYRTISDGDGVSIFGSSHIWVDHCSLSNCHDGLIDAIHGSTAITISN
NYMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSAAPTINSQGNRFLAPDNTFSKEVTKREDAPESQWSHWNWRSEGDLMLNGAFFT
PSGGGASSSYAKAYSLSARPSSLVGTITTYAGALNCRKGSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacccttccttctttctcttcttcttcttcctccttgtggtgacgtcttccgct
agagctccaccgcaagacccggagctaattgtcaaagaactggagagggagatcaatgga
tctaggagggagctgggatacctctcctgcggcaccggaaacccgatcgacgactgctgg
aggtgcgaccccaattgggaggccaatcggcagcggctcgccgactgcgcctacgggttc
ggcaagaatgcacttggaggaaagaatggcaagacctatgttgttacagacagtggggac
gacgacccggtgaacccaaagcccggcacccttaggtacgcggtgatccagaacgagcca
ctgtggatcatctttgcccgggacatggtcatacagctcaaggaggagctcatcatgaac
tcatacaagaccatagatggccgcggtgcaagcgtccacatagccaatggaccatgcatc
accatccagtatgtcaccaacatcatcatacatggggttcacatacatgactgcaagcaa
ggggggaacacctacgttcgggactcgccggagcactacgggtacaggaccatatcggac
ggcgacggcgtctccatattcgggtcaagccacatctgggtcgaccattgctccctctcc
aactgccatgatgggctcattgatgccatccatggctccactgccatcaccatctccaac
aactacatgacccatcatgataaagtcatgcttttgggtcacagtgacagttatacacag
gataaagatatgcaggttaccatcgcctttaatcactttggtgaaggcctcgttcaaagg
atgcctaggtgcagacatggatattttcatgttgtgaacaacgactacactcactgggag
atgtatgctattggtggaagtgcagcccccaccattaatagccaaggaaacagatttctt
gcacctgataacacgtttagcaaagaggtgacgaagcgagaggatgcaccggagagtcaa
tggagccattggaactggaggtcggagggcgacctgatgctcaacggagccttcttcact
ccgtccggcggcggcgcgtcgtccagctacgccaaggcttacagtctcagcgcgaggccg
tcgtcgctagtcggcactatcacgacgtacgccggagctctgaactgccggaaaggaagc
cggtgctag
DBGET
integrated database retrieval system
