Nymphaea colorata (blue-petal water lily): 116249558
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Entry
116249558 CDS
T07418
Name
(RefSeq) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116249558
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncol01007
]
116249558
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncol03016
]
116249558
Enzymes [BR:
ncol01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
116249558
Amino acid related enzymes [BR:
ncol01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
116249558
Transfer RNA biogenesis [BR:
ncol03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116249558
Prokaryotic type
116249558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF7229
DUF7040
YabA
Motif
Other DBs
NCBI-GeneID:
116249558
NCBI-ProteinID:
XP_031478544
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All DBs
Position
3:complement(21658816..21664996)
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AA seq
457 aa
AA seq
DB search
MLDINLFREDKGNDPERVRESQRRRFASVEIVDEIIRLDKEWRQRQFELENLRKDFNRIN
KEVARLKISGGDATEMIKSTDENKQLTAKKEIEVQEVRDVLYAKLETVGNLVHDSVPAFL
DEENNQVIRTWGEKRTEANLRNHVELVQLLGIADLNKGADIAGGRGFYLKGAGVLLNQAL
INFGLMFLTKRGYQPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATSEQPL
CAYHLGDWIHPTQLPLRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCVTGPNGND
SWDMHEEMIKNSEEFYKELNIPYQIVAIVSGALNDAAAKKYDLEGWFPASKTYRELVSCS
NCTDYQSRRLEIRYGQKKGNDQVKQYVHLLNSTLTATERTICCILENYQKEDGVEIPPPL
RPFMGTSFLPFQSKPAAEVKEKKSKTKGDGSNKKPSS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatcaatctcttcagagaagacaagggtaacgaccccgagcgggtcagggag
tcgcagagacggaggttcgccagcgtcgagatcgtcgacgagatcatccgtctggacaag
gaatggagacaacgccaattcgagctcgagaatttgcggaaggatttcaatcgcatcaac
aaggaggttgcccggctaaaaatctctggaggcgatgcaacggagatgattaagagcacg
gatgagaacaagcagctgacggcaaagaaggaaatcgaagtccaggaggtgagggacgta
ttgtacgccaaattggagaccgttggcaacctcgtccacgactctgtccctgctttcctg
gatgaagaaaacaatcaagttattcgaacgtggggtgagaaaaggacggaagcaaacttg
agaaatcatgtggaacttgttcagcttctcgggattgcagatctcaataaaggagctgat
atagctggaggaagaggcttttatttgaaaggagctggtgtacttcttaatcaagcatta
ataaattttggccttatgtttttgacaaaacgtggttatcagccacttcagactccattt
tttatgagaaaggacatcatggctaaatgtgctcagctggcacaatttgatgaggagctt
tacaaggttactggagaaggggatgacaagtatttgattgctacatcggagcagccttta
tgtgcctatcatcttggtgattggattcaccccacacaacttccacttagatatgctgga
tattctacttgctttcggaaagaagcaggttcacatggccgagatactttgggcattttt
agagtgcatcaatttgaaaaagttgagcagttctgcgttacaggccctaatggcaatgat
tcatgggatatgcatgaagaaatgataaaaaattctgaagaattttacaaagagttgaac
atcccctatcagatagttgccattgtttctggtgctttgaatgatgcagctgcgaagaaa
tatgatttagaagggtggtttcctgcatcgaagacatacagagagctggtgtcctgttca
aactgtacagattatcaatccagaaggctagaaatccgatatgggcagaaaaagggcaat
gatcaagtgaagcagtacgttcatttattgaactccaccctcacggcaacagagaggaca
atatgttgcattctcgagaactatcaaaaggaagatggtgtggagataccaccacctctg
cgtcccttcatgggcactagcttccttccttttcagagcaagccagctgcggaggtgaag
gagaagaagtccaaaaccaagggagatggtagcaacaagaaaccttcctcgtga
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