Nymphaea colorata (blue-petal water lily): 116250122
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Entry
116250122 CDS
T07418
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116250122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116250122
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
116250122
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
116250122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
HIRAN
TPR_12
PI-PLC-Y
Motif
Other DBs
NCBI-GeneID:
116250122
NCBI-ProteinID:
XP_031479400
LinkDB
All DBs
Position
3:3613328..3646088
Genome browser
AA seq
981 aa
AA seq
DB search
MLRGRASLVRLIGRRRRLSDSSFSPPADDASDRRKIQTKSNGESSSFVNELSSAHTVDHS
KLEDDENVDEQDLDWVTCPVCGKSIRCIHDIVNSHLDSCLTRRTPRKLSQSTLFQYSFNR
KSDRKRCCQDFSQSENDDMLKKSCKKNKPTRIYPSPSSVESSNFETAAYLDICLYRSSDS
CGVSSAEDVETKCSVTDDNVDKSTSLNYQDIYISKHNQVSEDDDVPLESLETYIVGRTFY
DDVDLKEGANIVFVRDPANVKDQFAIKIFHSDHMLGFLPRALAQYLSPLIDNSYLKLEGF
ISSLPKYSTDDVPIRVLCQKVSQFTSGAYSHQYFKSLWTNAIRAAESTRTFHPDMKRYQM
NFHILMQEVMNHHSYLFTDEERSFLARFEALSSESQRLFIRLYTRKGPWFRVSNVSYPEV
LNVELAVEELCGICKLNDYMCRWDPLKPTSTSMFREVLSVLTVQELREFSRIVHVKKNRS
GLRREQICDSLMASYADRTCLQLPKLIFEKIGSCISVSYLADSLLWLMQRLFFLNGEHDL
SAFLLVDLGLVRYPPYVISISQNLFPSRDDLLAYEEAIKVAQILDESLDKNNMEMVLHCI
EASDRYLSSQPQEVSQFSCHQPIGAFLFHFSAAWVYSKVVTLGISVLEHERRYEDAIKLL
KQLLNIILCDGKRGYWALRLSVDLEHLGRLDESLTVAEESLADPWVRAGLRIALQRRVLR
LGKPPRRWKVPDFAKLLKRKINEVHVRGIPLASKTGIKSRFYGYNGEQCGVEELALQHYA
GVHGWQGLHSESGIWMTLFALLMWDVIFADIPDVFRTRFQTSPLDLECDSFYPARESLIE
SQLQKIEEGVAGSILTASWNAHVGTCCKGVRWDQLPLSDLQLVVSCIKGPTLASLCRMLA
QDYRSWSSGMPDLLLWRLCDDKDPSDGCSSGSFCNSAKVKLVEVKGPNDRLSEQQHAWLL
ALMDCGFEVEVCKIRPMAIDE
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgttgagagggagggcgagccttgtccgcctcatcggaagacggagacggctctccgac
tcatcgttcagtcctcccgctgatgacgcctctgatcgccggaaaattcagacaaagagt
aatggtgaatcctcctcatttgttaacgagctgtcttcagcacatacggtggaccattcc
aaacttgaggatgatgaaaatgttgacgaacaagatttggattgggttacttgtccagtc
tgtgggaagagcatacgttgcattcatgatattgtaaactctcatctcgattcttgtctt
actagaagaactccaagaaagttgtctcaaagcaccctgtttcagtatagctttaatcgt
aaatctgacaggaagcgttgctgccaagattttagtcagtcagagaatgatgacatgcta
aaaaaatcttgcaaaaaaaacaaaccaaccagaatttatccatcgccaagctctgtagaa
agcagcaattttgagactgcagcgtacctggatatttgcttgtatagaagttctgacagt
tgtggtgtctcttcagctgaagatgtcgagacaaagtgttccgttactgatgataatgtg
gataaatcgacttctttgaattaccaggacatctatatttccaagcacaaccaagttagt
gaagatgatgatgtaccgttggaaagtttagaaacttatattgttggccgcacattttat
gatgatgtagacctgaaagaaggagcaaatattgtctttgtaagagaccctgcaaatgtt
aaggatcaatttgccatcaagatttttcactccgatcacatgcttggcttccttccacgg
gcactggctcaatacttgtctcctcttattgataattcttacttgaaacttgaggggttt
atttcttctcttccaaaatattctactgatgatgttcctattagagtgctctgtcagaaa
gtttctcaattcactagtggagcttattctcaccagtattttaagtccttatggactaat
gctattcgtgctgctgaatcaacaagaaccttccacccagacatgaaaagatatcagatg
aacttccatattttgatgcaagaggttatgaaccaccatagttatctattcactgatgag
gaaagatcttttttagcacgttttgaggctttatctagtgaaagtcaaaggctcttcatt
cgactttatacacgtaaagggccatggtttcgggtgtccaatgtgtcatatcctgaagtt
ctgaatgtggagctagcagttgaggaattatgtggtatttgtaaattgaatgattatatg
tgtcgttgggatcctctgaaaccgacctcgacatccatgtttagagaggtgctaagtgtg
ctcactgtccaggaactgcgggagttttcacgcattgtgcatgtgaagaaaaacagaagt
ggtttaagacgtgaacaaatttgtgacagcctaatggcatcatatgcagacagaacttgt
ttgcaactgccaaaattgatttttgaaaagataggatcgtgtatctctgtttcttattta
gcagattctctcctttggcttatgcagagattgtttttcctcaatggtgaacatgactta
tcagcctttctcttagtagatctggggttggtcaggtatccaccatatgtcatcagcata
tcacaaaatcttttccccagtcgagatgatcttcttgcatatgaggaggctataaaagtg
gcacaaatactggatgaatccttggacaaaaacaatatggagatggtcttgcattgtata
gaagcatctgatagatatctttccagccaaccgcaggaggtgtcacagttttcttgtcat
caacctataggagcatttctttttcatttttcagcagcatgggtttactcgaaggtggta
actttaggcatttctgtccttgagcatgaacgcaggtatgaagatgcaataaagcttctt
aaacagctgctaaatattattctttgtgatggaaaacggggttattgggctcttagattg
tctgtggatttagagcatctgggtcgtctggatgagagtcttactgttgcagaagagagt
ttagctgatccatgggttcgtgctggattacggattgctctacaaaggcgtgttttacgt
ttggggaagccaccaagacgctggaaggtgcccgattttgccaaattattgaagcgcaag
atcaatgaagtccatgtgcgaggaataccattggccagtaaaacaggaatcaagagcagg
ttttatggttataatggtgagcagtgtggtgtggaagaattggctctacaacactatgca
ggagtacatggttggcagggtctccattcagaaagtggcatttggatgacattgtttgcg
cttcttatgtgggatgttatctttgctgacataccagatgtcttcaggactaggtttcag
acatctccactagacttggagtgtgatagtttttatccggcaagggagagcctcatcgaa
tcccagctacaaaaaattgaggaaggagtggctggttcaatcctcacggcctcatggaat
gctcatgtgggaacttgttgcaagggtgtgagatgggatcaactacccttgagtgacctc
cagttggtcgtttcctgtattaaaggtccaaccttggcttcactctgccgcatgctggct
caggattacaggagctggtcaagtggcatgcctgacctgcttctttggcgcctttgtgat
gataaggacccttctgatgggtgcagttctggaagcttctgcaattcagcaaaagtgaaa
cttgtggaagttaaagggccaaacgatcgtctgtcagagcagcagcatgcatggctattg
gctttaatggactgtggctttgaggtggaggtctgcaaaatcaggccaatggcgatagat
gagtga
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