Nymphaea colorata (blue-petal water lily): 116250238
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Entry
116250238 CDS
T07418
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116250238
Membrane trafficking [BR:
ncol04131
]
Protein recycling
Others
EARP complex
116250238
Endosome - Golgi transport
Tethering complex
GARP complex
116250238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
COG4_N
Vps54_N
DUF401
COG5_N
Motif
Other DBs
NCBI-GeneID:
116250238
NCBI-ProteinID:
XP_031479649
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All DBs
Position
3:1802218..1835128
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AA seq
826 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLIQKLRCEIHRVDAEILAAVRQQSSSGTKAKEDLA
AATQAVKELMYKIGEIKGKAEQSEKMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVLASKRQYKEAAAQLEAANQLCSHFEAYRDVPKITELREKFRSIKQILKSHIFSD
FSSLGTVRLKEDGSLIQQLADACLVVDALEPSVREELVKTVCHKELAAYEQIFEGTELAK
LDKVERRYAWIKRQLRANEDIWKIFPQAWHVQYLLCIQFCKVTRTQLVEIFSNLKEKPDV
GVLLPALHKTLEFEEELAEKFGGGKTSSNKEIGTDSEETDNQKGENGSQTVLDIRKKYEK
KLAVHNGSGNDSESENSADLSVTAAGFNFRGIISSCFEAHLTVYVELEEKTLMENLEKLI
QDETWETEEGSQTNVLSSSMQVFLIIRRSLKRCSALTKNETLFNLFKVFQKILKAYATKL
SIRLPKGGTGIVAAATGTDGQIKVSDRDERVICYIVNTAEYCHKTSGELADSIGKIIDSQ
FVEAVDMSEVQDEFSAVITKSLMTLVQGLETKFEAEMAAMTRVAWGTIESVGDQSEYVNG
INAILTTSIPVLGSLLSPIYFQFFLDKLAASLGPRFYENIYKCKQISETGAQQMLLDTQA
VKTILLEIPTLGKQASGAPGYSTFVSREMSKAEALLKVILSPVESVADTYRALLPEGTPS
DFQRILELKGLKKTDQQMILDDFNKHSSGIAQQPPPVPTAVLPTSPAVNVSVTAAATTTI
ATREDVITRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccagtgctctagaatatatcaaccaaatgttcccaacagaggcttcatta
tctggagtagagccactcattcagaagctgcgctgtgagattcatcgcgtggatgctgaa
atattggcggctgttaggcaacagagtagctcaggaacaaaagcaaaggaagacttggct
gctgcaactcaagctgttaaagaacttatgtacaagattggggaaatcaaaggcaaggct
gagcaaagtgaaaagatggtacaagaaatttgtcgtgacatcaaaaagcttgactttgcg
aaaaaacatattacaacaactattactgctctgcatcgtctcactatgttagtttcagct
gtggaacaactacaagtgctggcttccaagaggcagtataaggaagcagctgctcaattg
gaggctgcaaaccagctgtgcagtcattttgaggcttacagagatgtgccaaaaatcact
gaactgagagaaaagttcagaagcatcaaacaaatactcaaatcacatatcttctctgat
ttctctagtttagggacagtgaggcttaaggaggatggtagcttaatccagcagttagct
gatgcttgcttggtggttgatgctttggagccatcagtaagggaagagctagtcaaaaca
gtttgccataaggaactagcagcatatgagcaaatttttgaaggcacagagctagcaaag
ctggacaaagtagagagaaggtatgcatggattaagcgtcaactgcgtgctaatgaggat
atctggaagatttttccacaagcatggcatgtacaatacttgctatgcatacagttttgc
aaggtgacaagaacacaacttgtggaaatttttagcaatcttaaagagaaaccagatgtt
ggtgtcctgttgcctgctcttcataaaactcttgagtttgaggaggaattggctgagaag
tttggtggaggaaagaccagctcaaacaaagaaattggaacggactctgaggaaactgat
aatcagaaaggagagaatggtagccagacagtgctggatatacgcaaaaagtatgagaag
aagttagctgtgcacaatgggagtggaaatgattctgagagcgagaattccgcggacttg
tctgtgactgcagcagggttcaattttcgtggaataatttcatcttgtttcgaagcccat
ttaaccgtgtatgttgagttggaggaaaaaacccttatggaaaatttggagaaacttata
caggacgaaacttgggaaactgaggagggcagtcaaactaatgttctctcaagtagcatg
caagtatttctgataataaggaggagcttgaagcgctgcagtgcattgaccaagaatgag
acattgtttaatttatttaaggtatttcaaaagatcctgaaggcatatgcaacaaaactt
tctattagattgcctaagggtggtacaggaattgttgcagctgcaactggcacagatggg
cagatcaaggtgtctgacagggacgagagggtgatatgctatattgtgaatacagcagaa
tactgtcataaaacctctggtgaacttgctgacagcattggaaagattattgactcacaa
tttgtggaggccgtggatatgtcagaggttcaggatgagttctcagctgtaatcaccaaa
tcattgatgacactagttcaaggtttggaaaccaaatttgaagctgaaatggctgctatg
acacgagttgcttggggaacaattgaaagtgttggtgatcagtcagagtatgtcaatgga
atcaatgcaattcttacaacgagtattccagtgcttggaagcctgctttctcctatatac
tttcaatttttcttggacaagttggctgcatctttgggcccacgcttctatgaaaacata
tacaagtgcaagcagatatcagaaactggagctcagcagatgctgctagatacacaggca
gtgaagacaattctgttggaaatccctactctcggaaagcaggcctctggtgcccctggc
tactcaacatttgtcagcagggagatgagtaaagctgaggcgcttctgaaggtgatctta
tctcctgttgaatctgtagctgatacataccgtgcccttctacctgaagggactccttca
gacttccagcggatacttgagctcaaggggctgaagaagacggaccagcaaatgatacta
gacgatttcaacaagcatagctctggaatcgcacagcagccaccaccagttccaacagca
gttttgcccacttctccagctgtcaatgtatcagtcaccgctgctgccaccaccaccatt
gctaccagggaggatgtgatcacccgtgcagcagctcttggcaggggtgcagcaactact
ggcttcaagcgatttcttgccctgactgaggctgcaaaagaccgcaaagatgggcctttc
cgtaaattgttcaatcagtga
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