Nymphaea colorata (blue-petal water lily): 116250311
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Entry
116250311 CDS
T07418
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 25-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116250311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116250311
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
116250311
BRITE hierarchy
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Gene cluster
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Motif
Pfam:
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
116250311
NCBI-ProteinID:
XP_031479805
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Position
3:complement(11442320..11457002)
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AA seq
430 aa
AA seq
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MHLIKAPIVAGREPGATAEERQLGLERSAELSMKVNQFILRRTNALLSEHLPPKVLEVVC
CKLTPLQVLFSSCDANKYLMLYQLARVKRAIVEDVKQSKILAYITALXNLCNHPKLIFDT
IRSGGSGSGFEDCLHLYPPELFSGRSGSWTGGGGIWVELSGKMHVLAILVSNYTQTLDLF
AQLCRERRYPFLRLDGSTSISKRQKLVNRFNDISKDEFVFLLSSKAGGCGLNLIGGNRLV
LFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLTAGTIEEKVYQRQMSKEGLQKVIQQEQ
LENLGLQANLISTEDLRDLFTLHANIRSEIHETMNCARCNTNYMQVEDGIKSLTQYVFER
RVAEDECHTDQPDADIGGFAKIAGCLEELKNSEKQLGRPLEEDLASWGHDSSSTTVPDVI
LQASAGEELL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgataaaggcaccaattgttgctggaagggagcctggtgcaacagcagaagag
agacaactggggctagagagatctgctgaacttagtatgaaagtaaaccaatttatactc
agaagaacaaatgccttgttatcagagcacctaccaccaaaggtattagaggtggtttgt
tgcaaactgactcctcttcaagttttgttctcttcttgtgatgctaataaatatcttatg
ctttaccaactggcacgggttaaaagagccattgttgaagatgtgaaacaatccaaaatc
ttggcatacattacagctctttaaaatctgtgcaatcatccgaagctcatttttgacact
attcggagtgggggttcaggttctgggtttgaggactgtttgcatctttacccacctgag
ttattctctgggagatctggatcatggactggtggaggtggtatctgggtagaattgtct
ggaaaaatgcatgtcttggcaattcttgtttcaaactacacccaaacgttggatcttttc
gctcagttgtgtcgtgaaagaagatatcctttcctaaggcttgatgggtccacttcaata
agcaaaaggcaaaagctcgtcaaccgatttaatgacatatcaaaggatgagtttgtgttt
ctcttaagcagcaaggctggtggatgtggacttaatttgataggtggaaatcgtttggtt
ctttttgatccagattggaatcctgccaatgacaaacaggcagctgcaagggtttggaga
gatggacagaagaagcgagtgtacatatacaggttcctaacagcaggaactattgaggaa
aaggtctatcaacgtcaaatgtcgaaagaaggccttcagaaagtaattcaacaagagcaa
ttggaaaaccttggactgcaggctaatcttatttctacagaagacttgagggatcttttc
accttgcatgctaacataaggtcggaaattcatgaaactatgaactgcgcacgctgcaat
accaactatatgcaagtcgaagatggcataaaaagtctgacacagtatgtatttgaaaga
agggtggcagaagatgaatgtcacactgatcagccggatgctgatattggtggatttgca
aagattgctggatgccttgaagagttgaaaaattcagagaagcaactgggaagacctctt
gaggaggacttagcaagctgggggcatgattcctcttcaactactgttcctgacgtgatt
cttcaagcttcagctggtgaagagcttttatag
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