Nymphaea colorata (blue-petal water lily): 116250579
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Entry
116250579 CDS
T07418
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncol03041
]
116250579
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116250579
Spliceosome [BR:
ncol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116250579
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
116250579
NCBI-ProteinID:
XP_031480170
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All DBs
Position
3:18006319..18030356
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AA seq
1186 aa
AA seq
DB search
MNASSRYCHCFVLPPRHRGISFSRPLLLSNGCSFSFLSLTPTKFRAQERVRASFSSEKEA
VDLTSNRLSEGEDDDEDEDEAAEEYDELAERTWSYEDGEEEEEDEYGLEEEEEGEEEEEE
EEEKGLSSEELLLKSREAKRQRVDRLLSGAREYGEGIVSLGDLISIYDFRIDKFQRLAIE
AFLRGLSVVVSAPTSSGKTLIAETAAASTLIRGRRLFYTTPLKALSNQKYREFRDAFGES
NVGLLTGDSAINKDAPILIMTTEILRNMLYQSVGMVSAGSRLFLVDVIVLDEVHYLSDIS
RGTVWEEVVIYCPKEVQLLCLSATIANPEELAGWISQIHGPTELVTSAKRPVPLNWHFSM
KSSMLPLLNEKGNGMNRRLSVKYLQQSALDDKSYEEGFRRKNFRKSGKDRIYGHSNTLMG
QARLSENDMNALRRSQVPQIRDTLRHLRTRNMLPTIWFVFSRRGCDAAVKYLEDCNLLDE
FEMGEVELALKKFKFQFPDAVREISVRGLLQGVAAHHAGCLPLWKSFIEELFQRGLIKVV
FATETLAAGINMPARTTVISSLSKRTENRRVLLSSNELLQMAGRAGRRGIDKEGHVVLVQ
TPFEGAEECCKLLFRGAEPLVSQFTASYGMVLNLLGGSRVTHKSKEDDLKVFRAGRTLEE
ARQLVEKSFGNYVGSNVMLAAQEEYQKIQEEIELLTFETSAEAIDRKCREQLPEMAYKEI
FEMQEELRVQKRIRKQLRRTLEMERMSALKPLLQGSQGGLLPYICLQYKDKETAQHFIPA
VYLGKLETFCSIKLPDLDDDGQSLEVETIELTQDLGNTKSSEEAKPCYYVALGSDNSWYL
FTERFIKTVYRTGLPDAPLVHGDLSPSCIMRQLLEKHDLVWEKLSSSEFGNLWCMEGSLE
TWSWSLNVPVLSSLSMDDEVQEISPTYSQALESYTDQRSKVKRLKKKLMNSRGYKEYKRI
IDIASVTREKIERLKDRSNRLISRIQQIEPSGWKEFVQVSNVIHEARALDISTHTIFPLG
ETASAIRGENELWLAMVLRNKILVSLKPLQLAAVCGSLVSDGLKVRPWKDNSYIYEASPV
VTNVIKCLDVQRSSLLKLQAKYGVEIPCELDGQFSGMVEAWASGLTWREIMMDCAMDEGD
LARLLRRTIDLLAQIPKLPDIDHSLQTNASTAAHVMDRPPISELVG
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttcgtctcggtactgtcactgtttcgttcttcctccgcgtcaccgaggaatt
tctttttcccgccctctccttctctcgaacggttgctctttctccttcctctccctaact
cccaccaaattccgcgcccaagaacgtgtccgggcatctttctcatcagagaaagaagcc
gtcgacttgaccagtaacaggctttctgagggcgaagatgacgatgaggatgaggacgag
gctgccgaagagtatgatgaattagctgagaggacgtggagttacgaagatggggaggag
gaagaagaagatgagtatgggttggaggaggaggaggaaggagaggaagaagaagaggaa
gaggaagaaaaggggttgagttcggaggagttgctgttgaagtcgagggaggcaaagcgg
cagagagtggacaggctgctttcaggagccagggagtacggggaaggcatcgtctctctg
ggggacctcatatcgatttatgacttccgaatcgataaatttcagcggttagccattgaa
gcattcttgagaggtttgtcagttgtagtgtccgcaccaacaagtagtgggaagacttta
atagctgaaactgcagcagcatctacattaattcgaggaaggcgcttgttctacaccacc
ccactgaaggcattatccaaccagaagtatcgggaatttcgtgatgcatttggagaaagc
aatgtggggctcctcactggtgattctgcaataaacaaagatgcaccgattttaatcatg
acaacagagattctgcgcaatatgttatatcagagtgttggtatggtttcagcagggagt
agattattccttgttgatgtgattgttttagatgaggtgcactatctcagcgacatatct
cggggtaccgtttgggaagaagttgtgatttattgtccaaaagaagtacaacttttgtgc
ctctcggcaactattgcaaatcctgaggagctagcgggttggattagtcagattcacgga
cctacagaattagttacctctgcaaagcgacctgttcctttgaactggcatttctccatg
aagagttccatgttgccactccttaatgagaaaggaaacggaatgaaccggaggctttca
gtaaaatatttacagcagtctgctttggatgacaaatcatatgaggaaggattccggaga
aaaaattttagaaaatctgggaaagatcgcatctatgggcacagcaacaccctaatgggg
caagcacggttgtcagagaatgacatgaatgctctacgtcgttcacaagtaccacaaatc
agagatacgttacgtcatcttaggacaagaaatatgcttcccactatttggtttgtattt
agtcgtagaggatgtgatgctgctgtaaagtaccttgaggattgcaatctcttggatgaa
tttgaaatgggtgaggtagagctggccttgaagaaattcaagtttcagtttccagacgct
gtcagggagatctctgtaagaggtcttctgcagggagttgcagcacatcatgctggctgt
ttgcccctttggaaatcatttattgaggagcttttccagagaggccttattaaggttgtt
tttgccacagaaaccctggctgctgggattaacatgccagctcgcactacagttatttca
tctctcagtaaaagaactgaaaacaggcgtgtactgttaagctctaatgagctacttcag
atggcgggtagagctgggcgcagaggaattgataaagaaggccatgttgtccttgttcag
actccatttgaaggagcagaagaatgctgcaagcttctcttccggggtgctgagcctctt
gtctcacaatttactgcttcatatgggatggttctcaacctccttggtggatcaagagtt
actcataaatctaaggaagatgatctcaaggtgtttcgtgctgggcgaacattagaagaa
gctcgtcagctagttgagaagagctttggaaattatgttggaagcaatgttatgctggca
gcacaagaggaatatcaaaaaatacaggaggagattgaacttctaacatttgaaactagt
gctgaagccattgataggaaatgcagggaacagttgcctgagatggcatataaggaaatc
tttgaaatgcaagaagaactgagggttcaaaaaaggataagaaaacaactgcggcggacc
cttgaaatggaaagaatgtcagcattgaagccacttttgcaagggtcacaaggcggccta
ctgccatacatatgtttacagtataaggacaaggaaacggctcagcatttcatcccagct
gtgtatttggggaaacttgaaactttctgttctataaagcttcctgacttggacgatgat
ggccaatctcttgaagtggaaaccatcgaattgacacaagatcttggaaatactaaatca
tcagaagaagccaaaccttgttattatgtggcccttggatctgataattcgtggtatctg
ttcacagagagatttattaagacagtttatagaactggtctgccagatgctcctttggtt
cacggcgatttgtcaccaagctgcataatgagacaacttcttgagaagcatgacttggtg
tgggagaaactttcgagttctgaatttggtaacttatggtgcatggaaggatcactagag
acatggtcatggagtttgaatgtacctgtcttgagtagcttatctatggatgatgaggtt
caagaaatatctccaacgtatagtcaggctctggagagttacactgatcagaggagcaag
gttaaacgtttgaagaaaaagctcatgaattcaagaggttacaaggagtataagaggatc
atagatatagccagtgttacacgggagaagattgaacgcttgaaggatagatcaaaccgt
ttgataagtaggatacagcagattgagccttctggatggaaggagtttgtacaggtcagc
aatgtcatacacgaggcaagagctttagatatcagcacacacacgatattccctcttggc
gaaactgcatcagcaatcagaggagaaaatgaactttggttagcaatggttcttcgaaat
aaaatattagtgagcttaaagcctttacagctagctgcagtttgtggtagtttggtttct
gatgggctaaaagttcgtccatggaaggataacagttatatatatgaagcatcacctgtt
gtgacaaatgtcatcaaatgtttggatgttcaaagaagctcacttttaaagctacaagct
aaatatggggtggagattccatgtgaacttgatggccaattctctggaatggttgaagcc
tgggcttctggcttaacctggagagagattatgatggattgtgcaatggatgagggagac
cttgctagactcttgcggcgcacgattgatcttctggctcaaatacctaaactgccagac
attgaccattcgttgcaaacaaatgcatctacggcggcacatgttatggatcgacctcct
atcagtgagcttgttgggtaa
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