Nymphaea colorata (blue-petal water lily): 116250602
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Entry
116250602 CDS
T07418
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116250602
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncol01009
]
116250602
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116250602
03036 Chromosome and associated proteins [BR:
ncol03036
]
116250602
Protein phosphatases and associated proteins [BR:
ncol01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116250602
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116250602
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116250602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
Adaptin_N
SCD
CLASP_N
TAF6_C
Cnd1
Motif
Other DBs
NCBI-GeneID:
116250602
NCBI-ProteinID:
XP_031480214
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All DBs
Position
3:complement(14805716..14818834)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGAEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMKES
DLVDWFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPDMLKAELRSIYSQLCQDDMPMVR
RSAASNLGKFAATVESNHLKTDIMTIFEDLTHDDQDSVRLLAVEGCAALGKLLEPQDCVT
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDQVFSIREAAANNLKRLAEEFGPEWAMHHIIPQV
LNMIANPHYLYRMTILHAISLLAPVMGSDITCHKLLPVVINASKDRVPNIKFNVAKVLQA
LIPIVDQSVVDQTIRPCLVELSEDPDVDVRYFANQALQACDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtagatgagccactttatccaatagctatattgatagatgaattaaaaaat
gaagatattcagttgcggctaaactccatacgaagattgtctacaattgcacgggctctg
ggtgaggagagaactaggaaggagttaattccttttcttagtgagaataatgacgatgac
gatgaggtgcttcttgcaatggctgaggagttgggggtgtttattccttatgttggtgga
gcagaacatgctcatgttctgcttccaccattggagacattgtgcactgtagaggaaact
tgtgtaagagacaaggctgtggaatcactatgcagaattggttctcaaatgaaggagagt
gacttagtagactggtttattcctttggtaaagagactagcagctggtgagtggtttact
gcacgtgtttcatcatgtggattatttcatattgcttatcccagtgccccagatatgctt
aaggcagagctcagatctatatacagtcagttgtgtcaagatgatatgcccatggttaga
aggtctgccgcatcaaacttgggaaagtttgctgctacagttgaatccaaccatctgaag
acagatattatgaccatttttgaggatcttacgcatgatgatcaggattctgttcggttg
ttggctgttgaaggatgtgcagcacttgggaagttgttagagcctcaagattgtgtaact
catatacttcctgtcattgttaatttttcccaggataagtcttggcgtgttcgttatatg
gttgcaaatcagttatatgagctttgtgaagctgttggtcctgagcccactaggacggac
ttggtgcctgcatatgttcggcttctacgagataatgaggcagaggtgcggattgcagct
gcaggaaaagtaaccaaattttgtagaatattgaatccacaacttgctatccagcacatc
cttccatgtgtgaaggaattatcatcagattcttctcagcatgtgcgttctgctttagca
tcagtcataatgggaatggctccggtcctagggaaggatgccaccattgagcaacttctt
ccaattttcctttccctgctgaaggatgagtttcctgatgtacggttgaatattattagc
aaacttgatcaagtaaatcaggtgattggaatagatctcttatcgcaatctctccttcca
gcaattgtggagcttgcagaggataggcattggagagtccgacttgctataatagaatat
attcctttattggcaagtcaattgggcgttggtttttttgatgataagcttggtgccctt
tgcatgcagtggttggaggatcaggtcttctcaatccgtgaagctgctgcaaataacttg
aagcggcttgctgaagaatttggcccagagtgggcaatgcatcatattattcctcaggtt
ctgaacatgattgccaacccacactatttgtatcgaatgacaattctgcatgctatctct
ttactggcccctgtcatgggttctgatattacgtgccacaaactattgcctgttgtcatc
aatgcttcgaaggacagagtaccaaacatcaaatttaatgtggcaaaggtactgcaagcc
ctcattccaatagttgaccaatcggtagtggatcagacaatcagaccttgcttggttgag
ctcagtgaagatccagatgttgatgtgagatactttgccaatcaggcgctccaggcatgt
gatcaggtgatgatgtcttcttga
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