Nymphaea colorata (blue-petal water lily): 116250700
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Entry
116250700 CDS
T07418
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116250700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116250700
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116250700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116250700
NCBI-ProteinID:
XP_031480398
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Position
1:complement(2828730..2839322)
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AA seq
255 aa
AA seq
DB search
MASKGQGVSVPTYSPTVSARKSRASRDSKDGLRVDGRNTHQCRPAFMRTGAVNAAVGSAY
AEFGSTKVIVSVFGPRESKKAMAYSDVGRLNCSVSFMTFSTQIRGQGSDDKEMSSMLHKA
LEGAIMLETFPKTTVDVFALVMESGGGDLPVIISCASLALADAGIMMLDLVISTSVSCHG
KDLVIDPTLEEERCQDGGFMISFMPSRNEVTQLTITGEWSTAKVAEAMELCIDACLKLGN
VMRECLKAAATSVSE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaaggtcaaggagtcagtgttcccacgtactctccaacagtgagtgcgaga
aagagtagagcatcccgagactcaaaagatggattgcgggtcgatggccgtaacacccat
caatgtagaccagcatttatgagaacgggtgcagtgaatgcggcagttggttctgcttat
gctgaatttggcagcacaaaggtcattgtttcagtatttggtcctagagaaagtaaaaaa
gcaatggcatatagtgatgtagggcggctgaattgtagtgtaagcttcatgacattctcc
acacagattcgtggacagggctcagatgacaaagagatgtcctcgatgcttcataaagct
ttggagggtgctataatgttggagacttttcccaagacaactgtagatgtttttgctttg
gtcatggagtctggtggcggggatcttcctgtaattatatcatgtgcaagccttgcactt
gctgatgctgggataatgatgttggatcttgtaatttctacctctgtgtcttgccatggc
aaggaccttgttattgaccctacactggaagaagagcgttgtcaagatggtggatttatg
atttcttttatgccttcacgtaatgaggtcactcagttgaccataacaggagagtggtca
actgcaaaagtagctgaggcaatggagctttgcatagatgcatgtttgaagctgggaaat
gtcatgagagaatgcttaaaagcagcagctacctctgtttccgagtag
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