Nymphaea colorata (blue-petal water lily): 116250852
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Entry
116250852 CDS
T07418
Name
(RefSeq) DNA topoisomerase 3-beta
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03440
Homologous recombination
ncol03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116250852
03460 Fanconi anemia pathway
116250852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncol03032
]
116250852
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116250852
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116250852
DNA replication proteins [BR:
ncol03032
]
Eukaryotic type
DNA Topoisomerases
116250852
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116250852
FA (Fanconi anemia) pathway
116250852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
116250852
NCBI-ProteinID:
XP_031480668
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Position
3:complement(5877574..5898232)
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AA seq
874 aa
AA seq
DB search
MGKTPPKVLMVGEKPSIALAIANALSGGRMSTRRGATDVHEFDGTFQGFHVHYKVTSVIG
HVFSIDFPPAYQNWEATDPMDLFGAPTLKAESNPKAHICRHLRQEAHGCRYLVLWLDCDR
EGENICYEVIDCTGIRDMEGGQRVFRARFSSVTEKDILRAMNNLVEPDKNEALAVDARQE
IDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVQRYFQITTFKPEKFWAL
RCFITKNGYELQLDWERGKVFNFDIASMFQQLVVGDGMVKVVDISRKEERKTRPTGLNTV
NMLKVASSALGLGPHNAMQLAERLYTQGFISYPRTESTAYPASFDFKGTLAAQLNNPYWG
DDVRRLLDGEFHKPRSGSDAGDHPPITPMLGATQDTLGADAWRLYQYITQHFIGTVSPDC
IYLRTKVDFSAGRELFHVSGQSVISKGFTSVMPWLAVSENSIPEFSKGEGIKISKVELFE
GWTSAPDYLSESELISLMEKNGIGTDASIPVHINNICERNYVQVHAGRKLVPTPLGITLV
RGYQCIDPDLCLPDIRSFIELQITLIAKGKADHIHVVQHVLLQFQRKFSYFVKQIEGMDA
LFEAQFSHLADSGRMLSKCGKCVRYMKYISTQPPRLYCGTCEEVYHLPQKGTIKLYKELV
CPLDNFELVLFSLAGPDAKSFPLCPYCFNNPPFEGVDSLFGALHIGKGGNSGKSGKGIGM
PCSLCPHPTCRHSMISQGVCACPECEGTLLLDPVSAPKWRLCCNTCNCLVSLPEGAHRIS
TTKERCLECDSTIIEVDFNKKATPLSDGSTLYKGCILCDELLHSLVEMKHGKSYFKRMGG
RARGRGRGRGRGGGRGRGRGRGRQEDPKMSFRDF
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggggaagacgccgccaaaggttctcatggtgggcgagaagccgagcatcgctctcgca
atcgccaatgcgctgtcgggtggccgtatgtctacaaggcgtggtgctactgatgttcat
gagtttgatggaacgtttcaaggtttccatgttcactataaagtaacttctgtcattggg
catgtattcagtattgattttcctcctgcctaccaaaattgggaagcaaccgatcccatg
gatctttttggagcacctactttaaaagcagaatcaaacccaaaggctcatatttgtaga
cacttgcggcaagaagcacatggatgtaggtatctagtattatggctggactgtgatcgt
gaaggggagaacatatgttatgaagttattgattgtacaggcatacgggatatggaagga
ggccaaagggtattccgtgctaggttttcttctgtaactgagaaggacatactaagagct
atgaacaaccttgttgaacctgataagaacgaagcattggctgtggatgctcgacaagaa
atagatttgaaagttggagttgcatttacacggtttcagacacgatatttccaaggaaaa
tatggcaaccttgattcaagtgttatttcctacgggccttgtcaaacccctactcttgga
ttctgcgttcagagatattttcagattaccacatttaaacctgaaaaattttgggccctg
cgttgtttcatcaccaagaatggttatgaactacaactagattgggagcgtggtaaggtg
ttcaactttgatatagcatctatgtttcaacaattggtggttggtgatgggatggtgaaa
gtggttgatatatcaagaaaggaggagcgcaaaacacgtccaactggtctgaacactgtt
aatatgcttaaggttgcttccagtgctttgggccttggtcctcacaatgccatgcaactg
gcagagcgtctttacactcaaggctttatcagttatccgcgtacagaaagtacggcttat
cctgcatcatttgatttcaaaggcaccttagctgctcagctgaataacccttattggggt
gatgatgttagaagactactagatggtgaatttcataagccacggtctggatctgatgca
ggtgatcaccctcctataactccaatgcttggtgcaacacaagatacattaggagctgat
gcttggcgattataccagtacattacccagcactttattggaactgtgagccccgactgc
atctatctaaggacaaaggttgacttctctgctggacgggaattattccatgtttcaggt
caaagtgtcatatcaaagggattcacatcagtcatgccgtggttggctgtcagtgagaat
agtattcctgagttttccaaaggagaaggcataaaaatttcaaaagttgagctatttgag
ggatggacctcggctcctgattatctgagtgaaagtgagctaatatcgctgatggaaaag
aatggcattggcacagatgcatcaatccctgttcatataaataacatctgtgagcgcaat
tatgtacaggtacatgctgggagaaagttggttccaacaccgctaggaataacactagtt
agaggttatcagtgtattgatccagacctctgtttgccggacatccgcagcttcatagaa
cttcagatcacactgattgcaaaaggcaaagcagatcatatccatgttgtgcaacatgta
ctgctgcaattccagagaaagttctcttattttgtgaagcagatagaaggcatggatgca
ctgtttgaagctcagttctcgcatttagctgattctggtcgcatgcttagcaaatgtggc
aaatgtgttcgctacatgaagtacatttccacacagccaccacgattatactgtggaacc
tgcgaggaggtttatcatcttcctcaaaagggcacaattaagttgtacaaggagctggtc
tgtcccttggataactttgagcttgtcctcttctccttggctggcccggatgcgaagtct
tttcctctctgcccttactgtttcaacaacccaccttttgagggagtagattcgctcttt
ggagcccttcatattgggaagggtgggaactcaggcaagtcgggaaaagggataggtatg
ccatgttccctctgccctcacccaacatgccgacattcgatgatatcccaaggagtatgt
gcctgtcctgaatgtgaaggcactttactgcttgaccctgtcagtgcacctaagtggagg
ttgtgctgcaacacatgcaactgtcttgtctctctgccagaaggtgcccacagaatctct
accacaaaggaacgatgtttggagtgtgactcaacaattatagaggtggatttcaacaag
aaagcaactccgcttagcgatgggtcgactttgtacaagggttgtatcttatgcgatgag
ctgctgcattcgcttgtggagatgaaacatggaaaatcctacttcaagcgtatgggaggg
agagcaagagggagagggaggggtagagggagaggtggaggcagaggaagaggcaggggt
cgtggtagacaggaggacccgaagatgagcttccgagatttttga
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