Nymphaea colorata (blue-petal water lily): 116251025
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Entry
116251025 CDS
T07418
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Module
ncol_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116251025
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116251025
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
116251025
NCBI-ProteinID:
XP_031480938
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Position
3:19663869..19665835
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AA seq
415 aa
AA seq
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MLMANDIHVSTILFSLFILPSFFLHSTDGAATYNVLSYGAKADGATDNSAAFLKAWSAVC
AQSDAAVTMYVPSGSFLLHPTLFTGPCKSKSIVVQIDGNLVASSDYNLYEAAGYWLKFKN
VQGLTFQGGQLDAKGSALWECKAQKTNCPDGARSLVFNNAKDIKLKGFTSINSELFNIVI
DTSSNVQVDGLNIQSAATSPNTDGIHVEQSSGVTITNTYIKTGDDCISIGQGTQNLWIEK
VTCGPGHGISIGSLGKSANEAGVQNVTVKNVAFSGTTNGLRIKSWERSSNGFAKQILFDG
ATMDNVKNPIIIDQHYCPHNEGCPTENSGVKISNVVYKNIKGTSATQVAVDFSCSASAPC
QGISMANVQLTYKGQPAKSSCEHAFGSATGAMVPSSCLQSSGGSNRRLMASVSNS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggccaacgacattcacgttagtaccattctcttttcccttttcattctcccc
agcttctttctccattcaacggatggagcagcaacctacaatgtcttgagctatggtgct
aaagcagatggagccacagacaacagtgcagcatttctcaaggcatggtcagcagtgtgt
gctcagtcggatgcagcagtaaccatgtacgtgccctccggctccttcttgcttcacccc
accttgttcactggcccttgcaagagcaaaagtattgttgttcagatcgacggcaacttg
gttgcttcgtcggactacaatctatatgaggcagcaggttactggctcaagttcaaaaat
gttcagggactaaccttccaaggaggccaactggatgccaagggctcagcattgtgggag
tgcaaggcccaaaagactaactgtcctgatggggcaagatcgctcgtcttcaataatgcc
aaagatattaaattgaagggattcacctctatcaacagtgaacttttcaacattgtgatc
gacactagcagcaacgtgcaagtggatgggctgaatattcagtccgcagccactagtccc
aacacagatgggatacacgtggagcagtcgtctggtgttaccatcacaaacacttatatc
aagacgggagatgattgcatatctattggtcaagggacacaaaatctatggatagagaaa
gtcacttgtggacctggccatggtataagtatcgggagccttgggaaaagtgctaacgaa
gctggggtgcaaaatgttactgtgaagaacgtggcatttagtggtacaacaaatgggttg
agaataaaatcatgggaaagaagtagcaacggctttgctaaacaaatcttgtttgatggt
gcaacgatggacaatgtgaagaaccccatcataatagaccagcattactgtcctcacaat
gaaggatgccccactgagaattctggagtcaaaatctcaaatgtggtgtacaagaacatc
aagggaacatcagcaactcaagtggcagttgatttctcatgcagcgcaagtgcaccttgc
caagggatcagtatggcaaatgtgcagctgacctacaagggccagcctgctaagtcctcc
tgtgaacatgcatttggaagtgcaactggcgcaatggttccatcgagttgccttcaatca
tcgggtggctccaaccgtcgacttatggcttccgtctccaacagttga
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