Nymphaea colorata (blue-petal water lily): 116251266
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Entry
116251266 CDS
T07418
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Module
ncol_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116251266
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116251266
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
116251266
NCBI-ProteinID:
XP_031481292
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Position
3:complement(19635521..19637378)
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AA seq
413 aa
AA seq
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MANAIHISTILFSLFFLSSFFLHSTDGAATYNVLSYGAKADGATDNSAAFLKAWSAVCAQ
SDAAVTMYVPSGSFLLHPTMFTGPCKSKSTVVQIDGNLVASSDYNLYEAAGYWLKFKNVQ
GLTFQGGQLDAKGSALWECKAQKTNCPDGARSLVFNDAKDIKLKGFTSLNSELFNIVIDT
SSNVQVDRLNIQSAATSPNTDGIHVEQSSGVTITNTYIKTGDDCISIGQGTQNLWIEKVT
CGPGHGISIGSLGKSANEAGVQNVTVKNVAFSGTTNGLRIKSWERSSNSFAKQIVFDGAT
MDNVKNPIIIDQHYCPHNEGCPTENSGVKISNVVYKNIKGTSATQVAVDFSCSASAPCQG
ISMANVQLTYKGQPAKSSCEHAFGSATGTMVPSSCLQSSGGSNRRLMAFVSNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgccattcacattagtaccattctcttttcccttttctttctctccagcttc
tttctccattcaacggatggagcagcaacctacaatgtcttgagctatggtgctaaagca
gatggagccacggacaacagtgcagcatttctcaaggcatggtcagcggtgtgtgctcag
tcggatgcagcagtaaccatgtacgtgccctccggctccttcttgcttcaccccaccatg
ttcactggcccttgcaagagcaaaagtactgttgttcagatcgacggcaacttggttgct
tcgtcggactacaatctatatgaggcagcagggtactggctcaagttcaaaaatgttcag
ggactgaccttccaaggaggccaactggatgccaagggttcagcgttgtgggaatgcaag
gcacagaagacgaactgtcctgatggggcaagatcgctcgtcttcaatgatgccaaagat
attaaattgaagggattcacctctctgaacagtgaacttttcaacattgtgatcgacacg
agcagcaacgtgcaagtggatcggctgaatattcagtccgcagccactagtcccaacaca
gatgggatacacgtggagcagtcgtctggtgttaccatcacaaacacttatatcaagacc
ggagacgattgcatatccattggtcagggcacacaaaatctatggatagagaaagtcact
tgtggacctggccatggtataagtatcgggagccttgggaaaagtgctaacgaagctggg
gtgcagaatgttactgtgaagaacgtggcatttagtggtacaacaaacgggctgagaata
aaatcatgggaaagaagtagcaacagttttgctaaacaaatcgtgtttgatggtgcgacg
atggacaatgtgaagaaccccatcataatagaccagcattactgtcctcacaatgaagga
tgccccactgagaattctggagtcaagatctcaaatgtggtatacaagaacatcaaggga
acatcagcaactcaagtggctgttgatttctcatgcagcgcaagtgcaccttgccaaggg
atcagtatggcgaatgtgcagctgacatacaagggccaacctgctaagtcctcctgtgaa
catgcatttggaagtgcaactggcacgatggtcccatccagttgccttcagtcatcgggt
ggctccaaccgtcgacttatggcattcgtctccaataattga
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