Nymphaea colorata (blue-petal water lily): 116251465
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Entry
116251465 CDS
T07418
Name
(RefSeq) vacuolar sorting protein 3 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116251465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116251465
Membrane trafficking [BR:
ncol04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116251465
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
CNH
Vps39_1
Clathrin
Motif
Other DBs
NCBI-GeneID:
116251465
NCBI-ProteinID:
XP_031481613
LinkDB
All DBs
Position
3:complement(7675495..7702420)
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AA seq
1018 aa
AA seq
DB search
MGRMESGDRMVLEAVAEFETSHIPAFSSSLCSTSSNLGQISIRSLAISTTSASKTLIYAG
SQCGAILSFVFDPSQHHTRTDTDQDPGQRLSSTKTSSSRCVRVGNSPVESVIVVAEIDRV
LFLSDGFLHLVDRYLSSPVQKLVFLKGVSSVAQKLSFTDTMVSQTDSVSEDGSKKAWERV
GRISSRYNGFSVFTNYPQFAAIAGRKLVLCEMRSAGRVNDAPGAIGRVHDYGGFTVTVFR
EFQNFDAVTTMAWIDHSVIIGTASGYSLFSCITGQFSSIFSLPESSGPPLLKVMHRRKEV
LLLVDNVGIASNSLGQPVGGSMIFRHVPEAVGQISMYVVVFGDGKLDVYHRRTGVLVQSI
FCGERTGCSVIAEDDGGNEEFLACAVSDKVILFHQLSVEEQIKDLLRKKNIKEAISLVEE
LQAEGGVTKEMLSFVHAQVGFLLLFGLRFEGAVDHFLQSETMQPSEIFPFIMRDPNRWSS
LVPRNRYWGLHPPPIPLEDVVDNGLMAIHRGIFLRKAGVDTGADEGFLSNPPSRAELLES
AILNIIRYLKVSRDKDLMPPVKEGIDTLLLYLFRALDLTEDMEKLASSPNNCAVEELESL
LQDSGHLRTLAFLYASKGMYTKSLDVWRALALNLPNGSRKDALLRWDVQYPSANSTQKDA
ATQASHILEESSDKSIVLKHLEWIIEVDEELAVSVLTSEKRAEQLPPEEVLATISSKKVE
VMQRYLQWLIEDQGLEDSQFHTLYALSLAKPVVETIGTDVAKHDPSAAMLRADNVSDTIT
SMDIGFLVREKLQFFLDSSDLYDAEVVLDLIEGSELWLEKAILHRKLGHEALVLQILALK
LEDGEAAERYCAEIGRPDAYMQLLDMYLDPQDGKEPMFNAAVRLLHNHGESLDPLQVLEK
LSPNMPLQLASETLLRMLRARVHHYHQGQIVYNLSRAINLDTRLARFEERTRHVQINDES
LCDSCHTRLGTKLFAMYPDDSVVCYKCFRRQPEHICPVNGRDFQRDFVFKPGWLVKKL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatggagtctggcgatcgaatggtcctggaagccgtcgcagagttcgaaact
tcccatattccggccttctcctcatctctttgctccacttcctccaatcttggccaaatc
tccatccgttccttggccatctcgacaacctcggcctctaaaaccctgatttacgctggc
tctcagtgtggtgccatcttgtcctttgtgttcgacccatcgcagcatcacacaaggacc
gatacagatcaagatccaggtcaacgtttatcctcaacgaagacctcctcttcaaggtgc
gttagggtcgggaattctccggtggagtcggtgattgtcgtagcagagatcgatagagtt
ctctttctttccgatggtttcttgcatttggtggaccgctatttatcttcgcccgtgcag
aaactggtgttcctgaagggggtgagctctgtggcgcagaagctgagcttcactgatacc
atggtttcccagacagattctgtttccgaggatggttccaagaaggcatgggagagagta
ggcaggattagtagccgttataatgggttttccgtcttcacgaactacccgcaatttgca
gccattgcaggcaggaagttagtcctgtgtgagatgaggtcagctgggagagtgaacgat
gcgccgggcgctatcggtagggttcacgattatggcggttttactgtcacggttttcaga
gaatttcagaattttgatgccgtcacgaccatggcttggattgatcattctgtgatcatt
ggcaccgctagtggatattcgctcttctcgtgcattacgggtcagtttagctccattttc
tctcttccggagtcctcgggaccacccttgttgaaagttatgcatagacgcaaggaggtg
cttctgttggtggataatgttgggatcgcctcgaattctttgggccagcctgttggtgga
agtatgatattcagacacgttcctgaagctgttggccagatatcgatgtatgtggttgtc
tttggggatggtaaactcgacgtataccatcgaagaaccggtgttcttgttcaatcgata
ttttgtggggaaagaactggttgctcagttattgcagaagatgacggagggaatgaggag
tttctcgcttgtgcagtatctgataaggttatcttatttcatcaactgtcagtagaagaa
cagattaaagatctgcttagaaagaaaaacatcaaggaagctatatctctggtggaagaa
ttacaagctgaaggtggtgtgaccaaagagatgctctcttttgtgcacgctcaagtaggt
tttttgttactttttgggttgcgttttgaaggtgctgtagatcatttcctgcagtcagaa
acgatgcagccatcagaaatttttccatttataatgcgggatccaaaccgctggtcttct
ttggtacctagaaatcgctactggggtttgcatcctcctcctataccacttgaagatgtt
gtcgacaatggcttgatggctattcatagaggaattttcttaagaaaagcaggtgtagat
actggtgctgatgagggctttttgtcaaatccaccgagcagagctgaactcttggaatcg
gccatccttaacatcataaggtacttaaaggtgtcaagggataaggatttaatgcctcct
gtgaaggagggcatcgacacccttctattgtacctctttagagcccttgatcttactgag
gatatggagaaactggcgtcttccccaaataattgtgctgttgaggagttggaaagtctc
ttacaagactctgggcatctaagaacgcttgcttttctgtatgcgagtaaggggatgtac
acaaaatcccttgacgtgtggcgagctctggcgttgaatcttccaaatggttcacggaag
gatgcattgctgcgatgggatgtacaatacccttctgcaaactctactcaaaaggatgct
gcaacacaggcttcacatattcttgaggaatcttctgataaaagtattgttctgaaacat
ctagaatggatcattgaagtggatgaggagcttgctgttagtgtattaacatctgagaaa
agggcagaacagcttcctccagaagaagtacttgcaactataagttcaaaaaaagtggag
gttatgcaaagatacttgcaatggttaattgaagaccaaggtttggaagacagtcaattc
cacactctgtatgcactttcacttgcaaaacctgtggtggaaaccattggaacggacgtt
gctaagcatgatccaagtgctgctatgctcagagcggacaatgtctctgacacgataact
agcatggatattggatttcttgttagggagaaattgcagtttttcttggactcttcagat
ttgtatgatgcagaagtggttcttgatttgatagaaggatcagagttatggctagaaaag
gcaattttgcataggaaattgggacatgaagccctggttctccaaattttggccctaaaa
ctggaagatggtgaagctgcagaacgatattgtgctgagattgggagaccagatgcatat
atgcagctgcttgacatgtatctggatccacaagatgggaaggaacctatgtttaatgct
gctgtacgtcttcttcataatcacggcgaatctctagatcctctgcaagtgttggagaag
ttgtccccaaatatgccactccagcttgcttcagagacactgttacgaatgctgagagct
cgagttcatcattaccaccaggggcagattgtatataatctgtcacgagctataaatctt
gataccaggctggcaagatttgaggaaagaacaaggcatgtgcagatcaatgatgagagc
ctatgtgactcttgccacacacgtcttggcacaaaactttttgccatgtatcccgatgat
tcagtggtctgctacaagtgtttccgtcggcaacctgagcacatttgtccggtcaatggg
cgtgattttcagcgggattttgtgttcaagcctggttggctagtgaagaagctctga
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