Nymphaea colorata (blue-petal water lily): 116251587
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Entry
116251587 CDS
T07418
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116251587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116251587
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116251587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
116251587
NCBI-ProteinID:
XP_031481801
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Position
3:complement(24937042..24940931)
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AA seq
424 aa
AA seq
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MDAPDQAKLFVGGISWDTNEETLRDHFKKYGDVVDSVIMRDRNTGSTRGFGFVLFSDSSA
SDKALQDKHVISGRTVEVKKAVPRGEQQNGVNRTNSNNNNSSNNNTNNNSSSVQFRTKKI
FVGGLSSNLTEEEFKGYFEKFGKITDVVVMYDSATHRPRGFGFITFDSEEAVENVMQKSF
HELNDKLVEVKRAVPKDGNLGNHQNSSGRMSGGRGGYLYSNNHAAGIYSPYGPRYGVFLG
YAPPSPIPGYGNGRLGGYLSPVGGTFGGGGGGYGGGYAIGGYGGIPPQAAGYGAGFANGP
PVGPPRSPWNGPGIVSPSRSPGPFGAPVYPYASTASPGYMNGGRFISTSAGFHDTRGAAP
NSNGKWNHGSHDSKPTGGNSGNTVLASQPEGGKLDDHSSGYAGNNGSGGKLNQRGTDSRF
RSTP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggatgccccggaccaagccaagcttttcgttggcggtatttcatgggataccaacgaa
gaaaccctaagagaccacttcaagaagtacggtgatgtggttgactctgtcatcatgagg
gacagaaacacagggagcactcgcggctttggatttgtgctcttctctgattcctctgcc
tctgacaaggcccttcaagataagcatgttatttcaggcagaacggtagaagtgaagaaa
gctgtacctagaggggaacaacagaacggcgtgaatagaacaaatagtaataacaataac
agcagcaacaacaatacgaataacaactctagtagtgtccagtttagaaccaagaagatt
tttgttggtgggttgtcttctaatttgacggaggaagagtttaaagggtattttgagaag
tttggcaagatcacggatgtggttgtaatgtatgacagtgcgactcataggcctagaggt
tttggtttcatcacctttgactctgaggaggcggttgagaatgtaatgcagaaaagcttc
catgaattgaatgataagttggtggaggtcaagagggcagttccaaaagatggtaatcta
ggtaaccatcagaatagcagtggtaggatgagtggcggcagaggagggtatctgtacagt
aataaccatgctgctggtatttactccccatatggtccaaggtatggtgttttccttggc
tatgcgcccccgtctcccattccgggatatgggaacggaaggcttggtgggtatctctcg
ccagttggtggcacttttggtggtggaggtggtggttatggtggaggatacgccattgga
ggttatggagggatccctccacaggctgctggttatggggctggttttgctaatggccct
ccagttggacctcccagaagcccttggaatggtcctggcattgtttcgccaagccgaagc
cctgggccgtttggggctccagtttatccttatgcaagcactgcttcgcctggttatatg
aatggcggcaggtttataagtaccagtgctggctttcatgacactcgtggggctgctcca
aattcaaatgggaagtggaaccatggcagtcacgattccaaaccaacagggggaaacagt
ggaaatacagttttagcatctcagcctgaagggggcaaattggatgatcattcttctggt
tatgcaggcaacaatggatcaggaggcaaactgaatcagaggggcacggattcacggttt
aggtccactccttga
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