Nymphaea colorata (blue-petal water lily): 116252084
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Entry
116252084 CDS
T07418
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncol03000
]
116252084
03036 Chromosome and associated proteins [BR:
ncol03036
]
116252084
Transcription factors [BR:
ncol03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116252084
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116252084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
116252084
NCBI-ProteinID:
XP_031481996
LinkDB
All DBs
Position
4:complement(25360990..25383695)
Genome browser
AA seq
1606 aa
AA seq
DB search
MDIEDKELKSTATGQKAVVPTMARMERQEAELGCIVVEVQVDQVLSKSTVNKLEHKNELE
RTAGEIKMGEKVLSLSLKNDAKQDLEPTRKETEGRECGIEALNSKTNKVQCEQMELDSSV
AEIEDEQTISEDGEGESSDSYTDYSDKETTTSEGGDRLNYEVPLTDHEVDELIAELLETE
SKAAEAQETLEKESLAHVENEVRLELAGNLQGDDLDMAVEEEMKTFVEQWEEVLDDLEAE
SALLLEQLDGAGVDLPGLFKWIEQQAPEGCSTEAWRKRIHWAGSQMTNEVREAISGAENY
LQECRPVKRRHGKVLEEGASGFLAKKLKIDDGEEGTKDNLGKDWDCVNELLQPRGSTEGD
LFGSAHWASVYLASTPQEAANMGLKLPGVNEVEEIDDIDGCSGNPFYDAAVAGEKETGFT
DEQKINFRKIVEEDDLNISRKLQIHLKQRRHRNLRKRQQSVELNKLELEADSAYSFNSRG
TGDLGATGELSGEGMKSCSTSADLGDSSSPIIFGNGLLKHSRENEEHKEDPMVIIDSDDD
IDFKMENVSGHATSQSKMLTEPGLQGKELVEIVDDDSHLDYRKGTVVHMTVHTRIFRCTV
CFEVLEASDVRRHPVLEVIICESCKKSFEVKLSQKDPDCSECSCGWCGRSNDLINCKTCK
MLFCTICIRRNLGEDCLKPNGWVCCCCCRSMLEQLISDCKEALTTDSLVVSCSESGSELS
NGDIDVSMSNKKRHKKRIRRIMDDAELGEETKKKIAIEKERQEHIRSLHIAGKSWSAFIS
DQSGSDAKISAEELTGDAANGYIVNVAREENEEPIRVPSSISTFLKPHQIAGIRFMWENC
IQSVRKVKSGDKGLGCILAHTMGLGKTLQVIAFLYTAMRTVDLGLRTALVVTPVNVLHNW
RQEFVKWKPSELKSLRVFMLEDVSRENWQRAKLLAKWRRKGGVLLIGYAAFRNLSLGKFV
KDKNIAGEICEALQNGPDVLVCDEAHMIKNTRADITHALRQVKCQRRIALTGSPLQNNLM
EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLEDVKIMNQRSHILYEQLKGFVH
RMDSSVVKKELPPKTVYVISVKLSPLQRKLYKKFLDVHGFTNGRASNEKANRRSCFFAGY
QALAQIWNHPGLLQMTKEYKENQRREEAVENFLVDGSSSDDNLDRDIAGEKPKLKSEFPN
RKTDTGFFDEDSDWWLDVLEDKICREADYSGKMVLLIDLLSMSSEAGDKTLVFSQSLLTL
DLVELFLAKLPRRERQGKFWKQGKDWYRLDGSTEGSERQRLVEKFNSPANDRVKCALIST
RAGSLGINLHAANRVIVVDGSWNPTHDLQAIYRVWRYGQTKPVYAYRLVAHGTMEDKIYK
RQVTKEGLAARVVDRQQIHRTMSKEEVLHLFEFGDEEILEMMPELAKEGSSVSDQKKSEM
EDTDRKKEKIEVGLKLNPLPLPSGTCLPDKVMENLLNRHHPRWIVSYHEHETLLQENEEE
KLSKEEQDLAWEAFRKTVEWEEVHRISLDEANAPAPDHKPSNSAPINAIPPVKSGSRVRS
SLRRCTNLAHLLTLRGKGIQAGCSTVCMECAMEISWEGLNRDGRSR
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaagacaaggaacttaaatcaactgccactggccagaaggcagtggtgcca
actatggctaggatggaacgtcaagaggcagaattgggatgtattgtggtggaagtccag
gttgatcaggttttatcaaagtcaactgtgaacaagttggaacataagaatgagttggag
aggactgctggagaaattaagatgggggagaaagtattgagtttgtcactgaagaatgat
gctaaacaggacctagaaccaactaggaaggaaactgaaggaagggagtgtggcatagag
gctttgaactccaagacaaataaggttcaatgtgagcagatggagctggattcatctgtt
gctgaaatagaggacgaacagacaatctctgaagatggtgaaggtgagtccagtgattca
tatactgattattctgacaaagaaacaacaacatctgaaggtggtgaccgattaaattat
gaggtaccattaactgaccatgaagttgatgaactaatagcagaacttctagaaactgag
agtaaggcagcagaggctcaagaaactcttgaaaaggagtcacttgctcatgtggagaat
gaagttaggttagagttggcaggaaatcttcaaggagatgatctggatatggcagtggaa
gaagaaatgaaaacatttgtagagcagtgggaagaagtgctcgatgatttggaagctgag
agtgcactcttattggagcagcttgatggggctggggtggaccttcctggtctctttaag
tggattgagcaacaggcaccagaaggctgcagcacagaagcttggagaaaacggatacat
tgggctggttcccaaatgactaatgaagtcagagaggcaatttcaggtgcagaaaattat
ctgcaagagtgtcgccctgtaaaaaggcggcatggtaaagtattggaagaaggagctagt
gggtttcttgcgaagaagcttaaaattgatgatggcgaagaaggaacaaaggacaattta
ggaaaggattgggattgtgtaaatgaacttctccagcctcggggatccactgagggtgat
ttgtttggctctgcacactgggcttctgtatacttagctagtacaccacaagaagctgca
aatatggggctcaaactgcctggtgtcaatgaggtggaagaaatagatgatattgatggt
tgttctggaaacccattttatgatgctgctgttgcaggagagaaagaaacaggttttact
gatgagcagaaaataaatttccggaagattgttgaagaggatgatttgaatatttctcgg
aaactgcaaattcatttgaagcaaagaaggcacagaaatcttcggaaaaggcagcaaagt
gttgaacttaacaagctggagcttgaagctgattctgcttatagtttcaactctcgggga
actggtgatttgggtgctacgggtgagctcagtggtgagggcatgaagagctgcagcaca
tctgctgacttgggggactcttcgtcaccaattatatttgggaatggtttattgaaacat
tcacgtgagaatgaggagcataaagaggacccaatggtaataattgacagtgacgatgat
atagattttaaaatggaaaatgtgtctggtcatgctaccagtcagtccaagatgttaact
gaacctggtctgcaaggcaaagaactggtggaaattgttgatgacgattcacatcttgat
tataggaagggtactgttgtccacatgacggtgcacacaagaatttttcgttgtactgtg
tgttttgaagttctggaagcttctgatgtgcgtaggcatccagttttggaagtaatcata
tgtgagagctgcaaaaagtcttttgaagtgaagttatctcaaaaggatcctgactgctct
gagtgttcctgtggatggtgtggaaggagcaatgatctgataaattgtaaaacatgcaaa
atgttgttctgtaccatttgtatcagaaggaatttgggtgaagattgtctcaaacctaat
ggttgggtttgctgctgctgctgccgtagcatgttggaacagcttatctcggattgtaaa
gaagccctcacaacagatagcttggttgtttcatgctctgaaagtggctctgaattgtcc
aatggagatattgatgtttctatgagcaacaagaaacgccataagaagaggattaggaga
attatggatgatgctgaacttggggaagaaaccaagaagaaaattgcaattgaaaaggag
cgtcaagaacatataaggtcattgcacattgcgggaaaatcctggagtgcattcatatct
gatcagagtgggtccgatgctaaaattagtgctgaggaactgacaggggatgctgcaaac
ggttacatagtgaatgtagcccgggaagagaatgaggagcctataagggtgccttcaagc
atttcaaccttcttgaagccacatcagattgcaggaatacgttttatgtgggaaaattgc
attcaatctgttcgaaaggtgaaatctggagataaagggcttggttgcattttagctcac
accatgggccttggaaagactttacaggtcatagcatttctctatactgctatgagaacc
gtggatctgggacttagaacggcacttgtggttacaccagttaatgttctacacaactgg
aggcaggagtttgtaaagtggaaaccttctgagctgaaatcccttcgggtattcatgctg
gaagacgtctccagggaaaattggcagcgagcaaagttgcttgcaaagtggagacgtaaa
ggtggtgttctgctaattggctatgcagcttttcgaaacttatcacttgggaaatttgtc
aaagacaaaaatattgctggagagatctgtgaagccttacagaatgggcctgatgtcctg
gtctgcgatgaggctcacatgattaaaaatacaagggctgacatcactcacgccttaagg
caggtgaaatgccagagaagaattgctttaactggttcaccattgcaaaacaatttgatg
gagtattattgtatggttgactttgtgagggaaggattccttggaagcagccatgagttt
agaaacaggtttcagaaccctatagagaatggacaacatacaaattctacactagaagat
gtaaagatcatgaatcaaaggtcacacatcctctatgaacaattaaaaggatttgtccac
agaatggattcatcagtggtgaagaaggaattgcctcctaaaaccgtctatgtaatatct
gtcaagctttctccattgcagagaaagctgtataaaaaatttttggatgtccatggtttc
acgaatggcagagcttctaatgaaaaagcaaatagaaggagctgcttctttgctggatat
caggccttagctcagatatggaatcatccgggactactgcaaatgaccaaggagtacaaa
gaaaaccaaagacgtgaagaagcagttgagaattttctggtggatggcagttctagtgat
gacaacttagaccgtgatattgcaggagaaaagccaaagctgaagtctgagtttccaaac
aggaagactgatactggattctttgacgaggatagcgattggtggttagatgttcttgaa
gacaaaatttgcagagaggcagattatagtggtaaaatggtcttgcttatagatcttcta
tcaatgagttctgaggctggtgataagacccttgtctttagtcagagtttgttaactcta
gatcttgtggagttattccttgcaaagttaccacggcgtgaaagacagggtaaattttgg
aagcaaggaaaagattggtacaggttagatggaagcacagaaggttcagaaagacaaagg
cttgttgagaagttcaacagccctgcaaatgatagagtaaaatgtgcattaatatctaca
agggctgggtctctaggaattaaccttcacgctgctaaccgagtgattgttgttgatggc
tcgtggaatcccactcatgaccttcaagcaatctacagggtttggagatatgggcagacg
aagcctgtttatgcatacagattggtggcacatgggaccatggaggacaaaatatacaag
cgacaggttacaaaggaaggtcttgctgccagggtagtagataggcaacagatacaccga
acaatgtcaaaagaagaagtcctccatctctttgagtttggggatgaggaaatccttgaa
atgatgccagaactagccaaagaaggctcaagtgtgtctgatcaaaaaaagagtgaaatg
gaagacactgatcgaaagaaggaaaaaattgaagttggcctgaagttgaaccctttgcct
cttcctagtggtacttgtttgcctgacaaggtgatggaaaacttgcttaaccgacatcat
ccaagatggattgtaagttatcacgaacatgagacacttttgcaagagaacgaagaagag
aagctgtcgaaggaagagcaggatcttgcttgggaggcattccgcaagactgtggagtgg
gaggaagtgcatcgcatctcgctggatgaagcaaatgcaccagcaccagatcataaaccc
agtaattctgctccaataaatgccattcctcctgtcaagagtggctcgagagtccgatct
tccctacgcagatgtaccaatcttgcccatctcctaactctcaggggcaagggaatccaa
gcagggtgtagcaccgtctgcatggaatgtgccatggagataagctgggagggtcttaac
cgagatgggcgtagcagatag
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integrated database retrieval system
