Nymphaea colorata (blue-petal water lily): 116252297
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Entry
116252297 CDS
T07418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13 isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116252297
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116252297
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
Pre-60S particles
Helicases
116252297
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116252297
NCBI-ProteinID:
XP_031482317
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All DBs
Position
4:complement(24563763..24578038)
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AA seq
826 aa
AA seq
DB search
MAKKEKTLKTHAPKNLVPGPVTMKKKKKKTTEKRNKVSNPNAEIGPDALDSTRWSSSFLV
DESLSLLLGSSEGGFLSLEELDESDFVSCSGLDLQKLPSSASRSKDTEADDRNPSGDVKK
KEKKKKKNKDKTLKKQATVDADTDKDVSCLTSIQEPKMPDGGKEQDHAIVSHSKKRKSTE
EHLFANENSRKKKKKKKKEVKKTSQVDGLNVQNAELTEAHPDLETTGQRVSCLMEEVDEA
EFFAWKGLRLHPLLMKSIYELRFKEPTPIQKACIPMAAHKGKDIIGAAETGSGKTLAFGL
PILQRLLEEQEKASALNNEIVVDSLRALIVTPTRELAMQVTDHLKAAAKYTKIQVVSIVG
GVSSQKQERLLKRRPQIIVGTPGRLWELMSGGDIHLVELESLSFFVLDEADRMIENGHFQ
ELQSIIDMLPKVSGRSLDNGAEIAEGSHACETISRIQRKKRQTFVLSATVALSENFRRKL
KRGSLSSKSDTLNSMETLVERTGMRADAAIVDLTNASIMAHKLEESVIECKEEDKDSYLY
YILSIHGHGRTIVFCTSCAALRRVASILRILELPVWTLHSRMQQRARLKAIDHFRSSEHG
ILVATDVAARGLDVPGVRTVIHYQLPHSAEIYIHRSGRTARASSDGCSIALISPTDRSKF
SSLCKSFSKESLNAFPLDSSYMPAVVKRLSLAYRIDKVLHMNAQENSKKSWFERNAESLE
LNVEDDSSEGERESNHRQKRNMNLHLNHLKKELNKLLSRPLQPTTFSHRFVAGAGMSPLL
QQQLREFSHKKQIDHKNVKGQRRSKIVVIGRDLVEPLQELRKTTSL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaagagaaaaccctaaaaacccatgcccccaagaacttggtgcctggcccc
gtgacgatgaagaagaagaagaagaagacgacggaaaagaggaacaaggtctctaaccca
aacgccgaaataggtcctgatgcgttagattctacgcgatggagttcgtcatttctggtg
gacgaatcattgtctcttcttcttggctccagcgaaggaggttttctttccctcgaagag
ttggacgaatctgatttcgtctcttgttctggacttgacttacaaaagctgccatcaagc
gcttcgaggtcgaaagatacggaggccgatgaccggaatccctcaggcgacgtcaagaag
aaggagaagaagaaaaagaagaataaggacaagacgttgaagaagcaggcgaccgtggac
gctgatactgataaagatgtctcgtgtctcacttccattcaggagccaaagatgcctgat
ggaggtaaagaacaagatcatgctattgtttctcactctaagaaacgtaagagcaccgaa
gaacatctgtttgccaatgaaaatagcaggaagaagaagaagaagaaaaagaaggaagtg
aagaaaaccagccaagttgatggtctgaatgttcaaaatgctgaactgacggaagcacat
ccagatctggaaaccacggggcagcgggtaagttgcctgatggaagaagttgacgaggct
gaattctttgcttggaaaggtttgagacttcatcctttgcttatgaagtcaatctatgag
ttgcgattcaaggaacctactcctatccagaaggcatgcattccaatggctgctcataaa
ggaaaggatataattggtgctgcggaaactgggtctggcaaaacacttgcatttggtttg
cccatattacaacgcctgctcgaagaacaggaaaaagcttctgctctgaacaacgaaatt
gtcgtagattctctccgggctctgattgtgactcctaccagagaacttgctatgcaggtg
accgaccatcttaaagcagctgctaagtatacgaaaatccaggtggttagtattgttggt
ggggtgtcttcacagaagcaagagcggctattgaaaagaaggccacaaattattgttgga
acgcctggaaggctatgggaacttatgtctggaggagacatacatttggttgagttagag
tcgttatcattctttgtgctggatgaagctgatcggatgatagaaaatggacattttcaa
gaacttcaatctattatcgacatgttgcctaaagttagtggccgatctttggataatggg
gctgagattgcagaaggatcacatgcttgtgagacaatttcaaggatacaaaggaagaaa
agacagacctttgtgttgagtgcaactgttgcactatcagaaaattttcggaggaagctt
aaaagaggatctttgagctccaaaagtgatacactgaattccatggagactctcgtggag
cgaacaggaatgcgagcagatgctgctattgttgacttaacaaatgcttcaatcatggct
cacaagcttgaggaatcagtcattgagtgcaaggaggaagataaggattcatacttatat
tatattctgagcatccatggtcatgggcgcaccattgttttctgcacatcatgtgcagca
ttacgacgcgttgcttcaatattgcggattcttgaactgcctgtttggacgcttcattct
cgaatgcagcaaagagctaggttgaaggcaattgatcattttcgttcaagcgagcatgga
attcttgttgctactgatgttgcagcacgaggtctagatgtccctggtgtccggactgtt
attcattatcagttaccacattcagcagaaatttacatacatagaagtggaagaactgct
cgtgcctcttctgatggatgcagcattgcgcttatttccccaacagacagatctaagttt
tcttctctatgtaaatctttctccaaggaaagtcttaatgcgtttcctttagatagctca
tacatgccagctgttgtgaaacgtctttctcttgcttacagaatagacaaggttttgcat
atgaatgctcaagaaaattcaaaaaaaagctggtttgagcgtaacgctgagtcgcttgag
ttgaacgtggaagatgatagcagtgagggagaaagagaaagcaatcacaggcagaagaga
aatatgaacttgcatttaaaccatttgaagaaggaactcaataagctcctatcacgtcca
ttgcaacccacaacattttcacatcgctttgttgcaggggctggcatgtcacctcttctt
cagcagcaactgagagagttctctcacaagaaacagatagaccacaaaaatgttaaagga
cagagaagatccaaaattgtggtgattggccgtgacctagttgagcctctgcaagaactt
cggaagactacatctttataa
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