Nymphaea colorata (blue-petal water lily): 116252527
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Entry
116252527 CDS
T07418
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116252527
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116252527
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
116252527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
Rtf2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
116252527
NCBI-ProteinID:
XP_031482706
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All DBs
Position
4:20652600..20659736
Genome browser
AA seq
388 aa
AA seq
DB search
MELNTNTIKDAFDRVAKKQKLSASKTQEVIDQVGHEIVQALENLNSTMTTDEGAGPAKSI
LADLNKRLTEVSPASQLEGSQKELNVALGKYGKVIEKAFIPDIAKSYRNVEFDMQIVNQI
IATHFYRQGLFDLGDCFIDEAGAPDSSALKAPFLEMYQILEELKAKNLEPALKWVSVHHD
RLCQTGSTLELKLHRLQFVEILKKGDRNEALKYARSYLAPFAAVHMCEIQKLMACLLWVG
RLESSPYAELLSSPHWEEVSAELTQECCRLLGQSYESPLYVTIAAGTQGLPTLLKLANVM
AAKKQEWQTMKQLPVPVDLGSEFQFHSIFVCPVSRDQGSEENPPMMLPCGHVLCKQSISK
LSKSNTRIFKCPYCPVEANVGNCRQLYF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaacactaacaccatcaaggatgcatttgaccgtgttgctaagaaacagaag
ctatctgcctctaaaacccaagaagtaatcgatcaggtgggtcatgaaatagtgcaggct
ttggaaaatctgaattctaccatgaccactgatgaaggtgcaggccctgctaagtccatt
cttgcagacctgaacaagaggttgactgaggttagcccagctagccaacttgagggttca
caaaaggaattgaatgttgcactgggcaaatatgggaaggtcattgagaaggccttcatc
ccagatattgccaagtcatacagaaatgttgagtttgacatgcaaattgttaatcagatc
attgcgacacacttttacaggcaaggcctgtttgatctgggggattgctttatagatgaa
gctggtgcacccgactcatctgctcttaaggcccctttccttgagatgtatcaaatactt
gaggaactgaaagcaaagaaccttgagccagctttaaagtgggtatctgtccatcatgac
cgtctgtgccagacaggatccacgctagagcttaagctccacaggctgcagttcgttgaa
atactcaagaagggagacaggaatgaggctttgaagtatgctaggagctatctggctcct
tttgcagcagttcacatgtgtgagatccagaaattgatggcatgcctcttgtgggtgggt
cgcctagagtcttccccttatgcagaactgctatcatctcctcactgggaggaagtgtcg
gcagaactcactcaggagtgctgcagattgctgggccaatcttatgaaagtccattgtac
gtcactatagcagctggaactcaagggttgcccacactgcttaagctcgcaaacgtaatg
gctgccaagaagcaggaatggcagacgatgaaacagctgcctgttccggtggacttaggc
agcgagttccagttccactccatcttcgtctgtcctgtgtcacgcgaccaaggaagcgag
gagaaccccccgatgatgttgccatgtgggcatgtactctgtaagcaatccatatcaaag
ctgtccaagagcaacacacggatattcaaatgcccatactgcccagtagaagccaacgtg
gggaactgcaggcagttgtatttctga
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