Nymphaea colorata (blue-petal water lily): 116252541
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Entry
116252541 CDS
T07418
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116252541
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116252541
Factors involved in mRNA localization
Other mRNA localization factors
116252541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
116252541
NCBI-ProteinID:
XP_031482747
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Position
4:24945734..24972536
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AA seq
1289 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDDQPDFQGLNILLSTERQATVSPIEYADVSAYRLSLVEDTKA
INQLNSLTVEGKEMSAVLYTYRSCVKALPQLPESMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRLNGPTTTHIWSILKLLDVLVALDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDTDSMRDELDDLQIFLSTRWAILLNLQVEMFRVNNMEDILQILLL
FCVETLELDFTLLFPERHALLRVLPVLVVLAAASEKDSDSLFKRVKINRLVSIFKNDPVI
PAFPDLHLSPAAMLKELAMYFQKFSSQTRLLALPAPHEILPREAQEYQKHYLIVNHIGAI
RTEHDDFAVRFASALNQIVLLKQSDASDSEWCREVKGNMYDVVVEGVQLLSKWTGRIWEQ
CAWKFSHPCKDIFPQEHETSTSFSDYEKVVRWNYSPEERKALVELVSYIKSVGSMMQRCD
TIIADALWETIHGEVQDFVQNRLAIMLRTTFRKKKDLSRILSDMRTLSADWMSNTANPEV
ELPSVQHPGEDGNGNNFHPRAVAPTAAQVHCLQFLIHELVSGGNLRKSSGLFGSSGLDIP
PSELKLLESFFHKLSFFLHVMDYTATIATLTDLGFLWFREFYLETSRVIQFPIECSLPWM
LVDHVIESQDRGLLESVLIPFDIYCDSAQHALTALKQRFLYDEIEAEVDLCFDQLVFKVS
ENIFTYYKSCAASKLLDPSFIFASDNADKYYVPPIRFDSIFQMRRMKLLGRTIDLRSLIA
HRMNKLFRENLDFLFERFETQDLCAVVELQQLVDVLQLAHKLLSEELLLDSFPLILKEMQ
ENISLVSFSSRVSSQILTEIQNDLLPNFVLCNTTQRFIRLRKSHQSQKPQLPLVKLSFYC
GSQELNAAYQGFAQLYSEFFGLPHMCSITKLLGSRSIPWLIRGLLDLLTTKIASLEPKLS
VLQGSLPKSIGLLPYDGGIPGCVKFVQEHLHWASKSDLRSEILNVLKEVGIIICLMGLLD
IALKEAETAQFMQIAPWLGLIPGNDGQIQQALTESGHSPMVDLFKSITSAIISSPRCPST
TSFATLSKQAEAADLFYRNNLHTGSVLEYSLAFISAELDKYQSKWNATPKTGFIDITTAK
DFYRLFSGLQLGYLEEYSQETLNKSEVLGDSVAWGGCTIIYLLGQQMHFELFDFSYQLLN
VAEVESVAVAHYTSSERAKSASYLQGWDKLIDGAKKARRLNNHVFSMLKARCPLEEKMAC
AIKQSGAPLHRVKYENTISAFETLPQKGA
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcccgtcgaagaagcgattgccgcactgtctactttctcattagaggatgat
caaccagactttcaaggactcaatattttgttgtcaactgaacgacaggcaacagtcagt
cctatagaatatgctgatgtgtctgcataccgcctatcacttgtggaagacacgaaggcc
atcaaccagctgaattcacttactgtagaaggaaaggagatgtcagctgtgctttacaca
tatcgcagttgtgtcaaggctctacctcagttgccggaatctatgaagcaaagccaagca
gatttatacctagagacctatcaagttcttgatctggagatgagtcgtcttcgtgaaatt
caacgttggcaagcatcggctgcatctaagcttgcagctgacatgcaacgcttttcaaga
ccagaaaggcgccttaatggccccaccaccacccacatttggtccatacttaagttgctt
gatgttctggtggctctagatcaccttaagaatgcaaaagctagtatacccaatgatttt
tcatggtataaaaggacatttactcaagtgagtgcacaatggcaagatactgattcaatg
agggacgaattggatgatttacagatattcttgagtacaaggtgggctattctgctgaac
ttacaagtggaaatgtttcgtgtgaacaacatggaggacattcttcagattcttttacta
ttctgtgttgagactctggagttggattttacccttctgttcccagagcgccatgctctt
ctgcgtgttctgcctgtgctcgtagtcttagcagcagcatctgaaaaggatagtgattca
ctatttaaaagagttaaaatcaatcgtctcgttagcatattcaagaatgatcctgtcatc
cctgcatttccagaccttcatctttctcctgctgcaatgctgaaagagctagcaatgtac
tttcagaagttctcaagccaaacccgccttttggctttacctgcaccacatgaaatcctt
ccccgcgaggcacaagaataccagaaacattatctaatagtcaaccacattggagctata
cgtactgagcatgacgatttcgctgtacggtttgcgtctgcattaaatcagatcgtattg
ctgaagcagtcagatgcatcagattctgagtggtgcagggaagttaagggaaatatgtac
gatgtggttgtcgaaggtgttcagcttcttagcaagtggactggacgtatttgggagcag
tgtgcatggaagttttctcatccctgcaaagatatatttccacaggagcacgagacatca
acctctttttctgactatgaaaaggttgtccggtggaactatagtccagaagagaggaaa
gcattggttgagcttgtgagctacataaaaagtgttggttcaatgatgcagagatgtgat
accataatcgctgatgctttgtgggaaacaattcatggtgaggtccaagattttgtgcag
aatcggctagcaatcatgttaaggactacatttaggaagaaaaaggatctttctaggatt
ttgtctgatatgcggacactttcggcagattggatgtcaaacacagccaacccagaagtt
gagttgccatcggtgcagcatccaggtgaggatggcaatgggaacaactttcacccaagg
gcagttgctccaacagcagctcaggtgcactgtttgcaatttttaattcatgaacttgtt
tctggtggtaacttaaggaaatctagcggattatttggaagcagtggcttggacattcca
cctagtgaactaaaactcctggaatcattcttccacaaacttagcttcttcctgcatgtt
atggattacacagcaacaattgcaacattaacagatcttggattcctgtggtttagggaa
ttttatttggagacatctcgtgtaattcagtttccaatcgaatgttctcttccatggatg
ctagtggatcatgtgatcgagtctcaagacagagggctgcttgaaagtgttctgattcca
tttgatatatattgtgattctgcacagcatgctttaactgctctgaagcaacgtttctta
tatgatgaaattgaagccgaggtagatctttgctttgatcaattggtgttcaaagtgagt
gagaatatttttacatattataagagctgcgctgcaagcaagttactggatccatcattt
atatttgcatctgacaatgcggacaaatattatgttccacccatacgatttgattccata
ttccaaatgcggaggatgaagctgcttggcagaaccatagatctgcgaagtttgattgct
caccggatgaacaaattgtttcgagagaatcttgactttttgtttgaaaggtttgagaca
caggatttatgtgctgttgtggaactgcaacaactcgttgatgtccttcaacttgctcat
aaactcttgtcagaagaacttctattggattcctttcctctcatattgaaggagatgcag
gagaacatttcacttgtttcattttctagtcgagtctcttcacagattttgacagaaatt
cagaatgacctattgcccaattttgtcctttgcaatactacccagagatttatacgtcta
aggaagtctcatcagtctcagaaaccacagttacctttggtgaaacttagcttctattgt
ggctctcaggaacttaatgcagcctatcaaggatttgcacaattgtatagtgagtttttt
ggattacctcacatgtgttcgatcaccaaactactgggatcacgttcaataccttggctt
attagagggctgctagatctactaacaactaagattgcatctcttgagccaaagttgtcg
gtattgcaaggatcactgccaaagtcaattgggttgttaccatatgatggtggtattcca
ggttgtgtgaaatttgttcaagaacatctgcactgggcttcaaaatcagatctaaggtct
gaaattcttaatgttttaaaggaagtaggaatcatcatatgcttgatgggccttctggat
attgcactgaaagaagctgaaacagcacagtttatgcaaattgccccctggctagggtta
attcctggaaacgatgggcaaatacaacaagctttgactgagtctggacacagcccaatg
gttgacttgttcaaatctataacaagtgcaattatatcatctcctagatgtccaagtaca
acatcttttgcaaccttatcaaagcaggctgaagctgctgatctcttttacaggaataac
ctgcatactgggagtgtcttggagtatagtcttgcatttatcagtgctgagttggataaa
taccaaagcaaatggaatgctactccgaagactggcttcatagatatcacaacagcaaag
gacttctatcgtctgtttagtggtctccagcttggatatcttgaagagtacagtcaggaa
acgctgaacaagagtgaagttcttggtgattcagttgcctggggaggatgcacaataatc
tacttgcttggtcagcagatgcactttgaactctttgacttctcatatcaactcctcaac
gttgcagaggttgaaagtgtggcagttgctcattatacttcctcagaaagggctaaaagt
gctagctacttgcagggatgggataaactgatagatggtgcaaaaaaagctagaagattg
aacaaccatgtcttctcgatgctgaaagctcgttgtccactggaagagaagatggcatgt
gctataaagcaaagtggtgcgcctttacatcgtgtcaaatatgaaaacacaatttctgct
tttgaaacattgccgcagaagggagcttga
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