Nymphaea colorata (blue-petal water lily): 116252587
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Entry
116252587 CDS
T07418
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncol01009
]
116252587
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116252587
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116252587
Protein phosphatases and associated proteins [BR:
ncol01009
]
HAD phosphatases
Fcp/Scp phosphatases
116252587
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116252587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Dicer_dsRBD
FNIII-A_GpJ
Motif
Other DBs
NCBI-GeneID:
116252587
NCBI-ProteinID:
XP_031482809
LinkDB
All DBs
Position
4:complement(18635509..18647805)
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AA seq
951 aa
AA seq
DB search
MSRLAVVVYHGNTLLGEADVYPQNERFEAMDACKKEIRITRFSPPSERCPPLAVLHTISS
CGVCFKMESKSQAQDSPLFCLYNTCLRENKTAIVPLGEEDLHLVAMPARNKLQHSSYFWG
FGVSLRLYSACLSMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKISSELDPQRIA
GMLAEVKRYQDDKTILKQYVDNDQVIETGRVAKVQLEIVPPISDNHQSIARPIIRLHERN
IILTRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP
ESHLINSKELLDRIVCVKAGSKKSLLNVFQDEICHPKMAMVIDDRLKVWDDKDQPRVHVV
PAYAPYYAPQAEASNAVPVLCVARNVACNVRGGFFKEFDDGLLQHISGILYEDDFADLPN
APDVSNYLNSEEDSSLSTGNKDLPISEGLVDAEVERRFKDTNMAAPAVSVSTSNLDLRAQ
SSPLVLAAASNIVPETSSQAFSLGSQYANTSQKPADHVSSESSLQGSPGREEGEVPESEL
DPDTRRRLLILQHGQDSREHAAPDHPFPLRPSIHVPAPLPQSHGSWAGMEEEMAPRYLSR
NQRDYPIEHEAFSAHFHQPLFYHSEENSSSSDKSSYEAQTLLKEAQFGDDRPAQNGSHLN
NAPFAEIQQGFGRGNFNSRDIHFEAGRFSSHNPSSPLAALQEIAVKTGEKLDFKPSLNTA
VDLRFSFEVWFAGLRIGEGIGRTRREAQLLAAEESLRNLANRYISSISLETGALHGDSNK
ISHGNENGFVNDTRSSFGYLGSSREDMPIASTSENSSFLDQRPAGSLRSGAVSCLKELCM
MEGLHLVFQEQPSLSIDATSGAQVSAQVEVAGRVVGKGIGSSWEEAKQLAAQEAITTLKS
SSFTQRSQRRLSSPRSSYSVPVKRMKPEYVRGSSRVSPTSRYSSKNGPPVS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagactggcggtggttgtgtaccacgggaacaccctgcttggggaggcggatgtg
tatccacagaacgagagatttgaggcgatggatgcgtgtaagaaagaaattaggattacc
cgtttctcccctccgagcgagaggtgtcctcctttggcagtgcttcacaccatctcgtct
tgtggggtctgcttcaaaatggagtccaagtcccaagcgcaggattcgccacttttttgc
ctctacaacacctgcctcagagagaacaagactgcaattgtgccacttggagaagaagat
ttgcatttggtggccatgcctgcaaggaacaagcttcaacattcttcttacttctgggga
tttggtgtatcattgaggttgtatagtgcttgtttgagcatgctgaacttaaggtgcctg
ggcattgtgtttgatctcgatgaaacactcatagttgctaatacaatgcgttcatttgag
gaccgaattgaagcccttcaacgaaaaataagtagcgagttagatccacagcggattgcc
ggtatgcttgcagaggtcaagcgttatcaggatgacaaaacaattctgaaacagtatgtg
gacaacgaccaggttattgagactgggagagtggcgaaggttcaactggagatagtccca
cctatatctgataaccatcaatcaattgctcggccaattataagattgcatgaaagaaat
atcattttgacccgcattaatccattgatacgtgatactagtgttcttgttagactgcga
ccagcatgggaagaccttcgaagctacttaactgcaagaggacgtaaacggtttgaagtt
tatgtttgtacaatggctgaacgtgattatgctttggaaatgtggaggttacttgatcca
gaatcacatttgataaattctaaagaacttttggaccgaatagtatgtgtcaaagcaggt
tcgaagaaatcactgcttaatgtatttcaagatgaaatatgccatcctaagatggcaatg
gtgatcgatgatcggttgaaagtatgggatgataaagatcaacctcgagttcatgttgtc
cctgcatatgccccatactatgctcctcaagcagaggcaagcaatgctgttccagtttta
tgcgttgcaagaaatgttgcgtgtaacgttagaggtggctttttcaaagaatttgatgat
ggtctactacaacatatctctggtatactttatgaagatgactttgcagacttgccaaat
gcgcctgatgtaagcaactacctaaattcagaggaagattcttctctatcaactggaaat
aaagatttacccatttcagagggactggttgatgccgaagtcgagagaagattcaaggat
acaaatatggctgcacctgctgtttctgtctctactagcaaccttgatttaagagcacaa
tcttctccacttgttctggctgctgcttctaacattgtgccagaaacatcttcccaagct
ttttcacttggtagccagtatgcaaatacgtcacaaaaacctgcagaccatgtcagttca
gagtctagtttgcaaggttctcctggcagagaggagggagaggtccctgaatctgaactg
gaccctgacacacgtagaaggctacttatcttgcaacatggtcaggacagtcgggagcat
gctgcgcctgatcatccttttccattgaggccctctattcatgttcctgctccattgcca
caatcacatggaagctgggctggtatggaggaagagatggccccaagatatctttccaga
aatcaaagggattatcctatagagcatgaagctttttctgcacacttccatcaaccattg
ttttatcatagtgaggaaaattcaagttcttctgataaatcctcatatgaggctcagaca
ttgttaaaagaggcacaatttggagatgatcgcccagcgcaaaatggttcacacttgaat
aatgcgccctttgcagagatacaacagggttttggacgaggaaattttaactcaagggat
attcattttgaagctggtcgattttcttcccacaacccatcaagtccccttgctgctctc
caagagatagcagtaaaaactggggaaaagttggacttcaagccatcattaaatacagca
gtggatttgcggttttcctttgaggtgtggtttgctggcctgagaattggtgagggaatt
ggcagaacaagaagggaagcccagctactggctgcagaggaatctcttagaaatttagct
aatagatatatatcaagcatctccttggagacaggagccctgcatggggattcaaacaag
atttctcatggaaatgaaaatggttttgtcaatgatacgagaagctcctttggttatcta
ggatcatctagggaggacatgccaattgcaagtacttctgaaaactccagttttctggat
cagaggcctgcgggctctctaaggtcgggtgctgtctcttgtcttaaggaattgtgcatg
atggagggcctgcatctagtttttcaagagcagccttcactttcaattgatgcaaccagt
ggtgcacaagtatctgcacaggtcgaagtagcaggacgggttgtaggcaagggaattggc
tcaagttgggaagaagctaagcagctggctgctcaagaggcaatcacaactttgaagtct
tcatcatttactcagcgatcacagaggcggttaagctctcccaggtcctcttatagcgtt
ccagtgaaacggatgaagccagagtatgtccgaggatccagtcgagtttcacctacttca
agatactcctccaagaatgggcctcctgtttcctga
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