Nymphaea colorata (blue-petal water lily): 116252636
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Entry
116252636 CDS
T07418
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116252636
Membrane trafficking [BR:
ncol04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116252636
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
DUF2460
Motif
Other DBs
NCBI-GeneID:
116252636
NCBI-ProteinID:
XP_031482888
LinkDB
All DBs
Position
4:complement(6178382..6274973)
Genome browser
AA seq
1847 aa
AA seq
DB search
MEELAQRFRRLPRQPLTANLELDPSLNENLEQWPHLNELTHCYKADWVKDNSKYGHYETV
GNTSFQNQVFEGPDTDIETEMRLANARHFRNDDATDDDIPSTSGWQLSETSSSDAAHTRN
LQQLHFGASPLPAYEPVFDWESERLVIFGQRNPEPLPSSCSSGLKISVKVLSLSFQAGFV
EPFYGTICLYNRERREKLSEDFYFRMLPTEIQDGAMQSEQRGIFSLDSPSASICLLIQLE
KPTTEDGGVTPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAIVPLFESNVAVGGT
ASPSSPLAPSLSGSSSQESMVEPVAKISSDSKLAQYSSGSSVIVEISNLNKVKESYTEDS
LQDPKRKIHKPVKGTLRLEVEKLQTGNGDIDTVSENGSVNNEPADAVDQFVDSTFPKFPG
NGSGRPQNAHFKWNVLDGKEAHRNGSAIIQGNNFELGSGDFIAFDFRATTKSEPFSQLLH
CLYVYPLIMSLSRKRNLFIRVELRKDDIDIRREPLEAIYPRDSGSSLQRWAHTQVAVGAR
IACYHDEIKICPPAIFTPQHHLLFTMFHVDLQTKLEAPKPVVIGYAALPLSTHAQFHSDI
ALPVLRELVPHYLQESMKERLDYLEDGKHVFRLRLRLCSSLYPTNERIRDFFLEFDRHIL
RTSPPWGSELLEAINSLKNVDSTELLQFLQPILNMLLHLIGDGGETLQVAAFRAMVNILT
RVQQESSDGAERNRFLVTYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYD
DVLAMAWFFLELIVKSMALEQSSLFYNNIPSGDDIPPLQLKDGVFRCIMQLYDCLLTEVH
ERCKKGLSLAKRLNSSLAFFCYDLLSIIEPRQVFELVALYIDKFTGVCQPVLHDCKLTFL
QIICDHDLFVEMPGRDPSDRNYLSSVLIQELFLTWDHEDLTQRGKAARMLVVLMCKHEFD
ARYQKPEDKLYIAQLYFPLVGQILDEMPVYYNLSAVEKREVLIVVLQIIRNLDDASLVKA
WQQSIARTRLFFKLLEECLVLFEHRKPADSMMMGSSSRSPDGEGHGSPRYSDRLSPAINS
YLAEASRQEVRPQATPEGGYLWQRVSPQLSSPSQPYSLREALAQAQSSRIGSSTRALRES
LHPILRQKLELWEENLSAAVSLQVLEITEKISVAAASHSIATDYGKLDCITSLIMSLFSR
SQPLAFWNALVPVFNNIFSLHGATLMSRENDRFLKQVAFHLLRLAVFRNDSIRKRAVVGL
QILVRSSFCYFTHTTRLRVMLTITLSELMSDVQVTQMKSDGSLEETGEARRLRKSLEEMA
SEDKTRELLKECALSLDALQAVPDGSVEDRWSWLEVKQLADSLLQALDAGLEHGLLASVM
AVDKYAAAESFHRLANAYAHVPDLHIMWLLHLCDAHQEIQSWAEAAQCAVAVAGVIMQAL
VGRNDAVWSKDHVTALRRICPMVSGAISAEASAAEVEGYGASKLTVDSAVKYLQLADKLF
SQAELYHFCASILELIIPVYKSRRAFGQLAKCHTSLTNIYESILEQESSPIPFIDATYYR
VGFYGERFGKLDRKEYVYREARDVRLGDIMEKLSHIYESRMDGTHTLHIIPDSRQVNADE
LQPGVSYLQITAVDPVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGG
LEDQWKRRTVLQTEGSFPALVNRLLVVKSESMEFSPVENAIGMIETRTAALRDELEEPRT
SDVDHLPRLQSLQRILQGSVAVQVNSGVLGVCTAFLSGEPATRLRSQELQQLIAALLEFM
AVCKRAIRVHSRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggcacaacgtttcagaagacttccacgtcaaccccttactgcaaatctc
gagctggatccttcgcttaatgaaaacttggagcagtggcctcatctcaatgaattgact
cattgctacaaggctgactgggtcaaagataacagcaagtatgggcattatgagactgtt
gggaatacttccttccagaatcaggtttttgaaggtcctgacactgatattgaaacggaa
atgcgtttggctaatgcaagacatttcaggaatgatgatgcaactgatgatgatattcct
agcacttcagggtggcagttgtcagaaaccagttcttctgatgcagcacatacaaggaat
ctccagcagctgcattttggtgcgtcacctttacctgcttatgagccggtttttgactgg
gagagtgagagattggttatctttgggcagcgaaatccagagccccttccatcctcatgt
agcagtggattgaagatctctgtgaaggttctgtcgttgtcctttcaggctgggtttgtt
gagcctttctatggcacgatttgcttgtacaatagagaacggagagagaagctctcagag
gatttctattttaggatgctgccaacagaaatacaggatggagcgatgcaatcagagcaa
cgtggcattttttccttggattctccatcagcatctatttgccttcttattcagctggaa
aagcctacaacagaagatggtggtgtgacaccatctgtatactcccgcaaggaacctgtt
catttgactgagagggaaaagcagaagcttcaagtatggtccaggatcatgccataccga
gaatcatttgcttgggcaatagttccactatttgaaagcaatgttgctgttggtggaact
gcatctccaagtagtccattggctcctagtttatctggatccagctcccaagaaagtatg
gttgaacctgttgcaaaaatctcatctgatagcaagctggctcagtattcaagtggaagt
tctgtgattgttgagatatcaaatctgaataaagtgaaggaaagttatacagaagactca
ctccaggatcctaaaaggaaaatccataaaccagtaaagggtaccctgcggttggaagta
gaaaaactgcagacagggaacggtgatattgacactgtttctgaaaatggaagtgttaac
aatgaaccagctgatgcggtcgatcaatttgtagattctactttcccgaaatttccaggc
aatggttctggtaggcctcaaaatgctcatttcaagtggaacgtgttggatggaaaagaa
gcacacaggaatggttcagcaattattcagggcaataattttgaactaggaagtggagat
tttattgcatttgacttccgtgcgacaacaaaaagcgaaccattttcacagcttctgcat
tgcctttatgtctatccactgattatgagtttgagcaggaaaaggaacttgtttattagg
gtggaactgagaaaagatgacattgatattcgtagggagccacttgaggcaatatatcca
agagattcaggttcttcacttcagaggtgggctcatacacaagtggctgttggtgctagg
attgcctgctatcatgatgagatcaaaatatgtcccccagctatatttacacctcaacac
catcttctatttacaatgtttcatgttgatcttcagacaaaacttgaagctcctaagccg
gttgtcataggatatgctgctcttccattgtcaacgcatgcacagtttcattctgacata
gctttaccagtgttgagagagctagtaccgcactatctccaggagagcatgaaggaacgt
ctggattacttggaagatggaaaacatgtgtttaggctgcgattaaggctatgctcttct
ttgtacccaacgaatgagaggataagagatttctttcttgaatttgacaggcatattctt
cgcactagccctccttggggctctgaactgctagaggctattaacagcttaaagaatgtt
gattcaactgaactcttacagtttttgcagccaattcttaacatgcttctgcatcttatt
ggtgatggtggtgaaacccttcaggttgcagcctttagagctatggtcaatattcttaca
agggtgcagcaggaatcttctgatggtgcagaaagaaatcgttttcttgttacatacgtg
gactatgcttttgatgattttggtggaaggcagccaccagtttatcctggtttatcgact
gtttggggaagtttggctcgaagcaaggctaaaggttatcgggttggacctgtatatgat
gacgtcttggcaatggcatggttctttctggagctcattgtgaagtcaatggcattagaa
caatctagccttttctacaataatattccatcaggtgatgatattcccccattgcaactg
aaagatggtgtgttcagatgcattatgcagttgtatgattgtcttcttacggaagttcat
gagcgctgtaagaagggtttgagcttggcaaaacgtttgaatagcagcttggcatttttc
tgttatgatcttttatcaataatagagcctcgtcaagtctttgagttggttgccttgtac
atcgacaaatttactggtgtttgtcaacctgttctgcatgattgcaagcttacgttcttg
cagattatatgtgaccatgatctttttgtcgaaatgcctggaagagatccatcagacagg
aactatctttcttccgttctaatacaagagctcttcctcacctgggatcatgaagattta
acacaacgtggcaaagcagctcggatgttggtggttcttatgtgcaagcatgagtttgat
gctcgataccagaagcctgaggacaaattgtatattgcacaactatattttccattggtt
ggacagattttagatgagatgcctgtctactataacttaagtgcagtggaaaagcgtgaa
gttctaatcgttgtactgcaaattattcgtaacctggatgatgcatcccttgttaaggct
tggcaacagagcattgctaggaccagactatttttcaagctccttgaagaatgcctagtc
ctttttgagcataggaaaccagctgatagcatgatgatgggatctagttctcgaagtcct
gatggtgaaggacatggatccccaaggtattcagacaggctttctccagcaatcaacagc
tatttggctgaggcctctcgtcaggaagttcgacctcaggctacaccagagggtggatat
ttatggcaaagagtcagtccccagttaagttcaccaagccagccttactctctaagagaa
gctcttgcacaagctcaatcttccaggattggatcttctactagagcactgagagaatcg
ctccatccaatattgaggcaaaagctggaactctgggaagaaaatttaagtgcagctgtc
agtcttcaagttctggaaatcactgagaaaatttctgttgctgctgcttctcacagtatt
gccacggactatgggaagttggattgtataacatctttgattatgagtttgttttctcgt
agccaaccattagctttctggaatgctcttgtacctgtgtttaacaatattttcagcctt
catggggcaacactgatgtcgagggaaaatgatcgttttctgaagcaagttgctttccat
ctactccgacttgcggttttcagaaatgattctataaggaaaagggcagttgttggacta
cagattcttgtcaggagttcattctgttattttacgcataccactcgtcttcgagtgatg
ttgacaattactttgtcggagctgatgtctgatgttcaagtcactcagatgaaatctgat
ggctcacttgaagagactggggaagcacggcgtcttaggaagtcactagaggaaatggct
agtgaggacaagacacgtgagttactgaaagaatgtgctctttctcttgatgctcttcag
gcagttcctgatggctcagtggaggatcgctggtcctggttggaggtaaagcagctggct
gatagtttgcttcaggctcttgatgctggccttgaacatgggcttttggcctctgtaatg
gcagtagataaatatgcagctgctgaaagcttccatagacttgccaatgcttatgcccat
gttccagaccttcatattatgtggctactgcatttatgtgatgctcatcaggagattcag
tcttgggcagaggctgctcagtgtgctgttgctgttgctggtgtcattatgcaggctctt
gtaggcagaaatgatgctgtctggagtaaggatcatgtgactgctctacgtaggatctgt
cccatggtcagtggtgcaatttctgctgaagcatctgcagctgaagtggaaggatatggt
gcatcaaaactgacagttgactctgctgtgaagtacttgcaacttgcagacaagctattc
tctcaggcagagttgtatcatttctgtgcgagcatcttagaactcatcattccagtttac
aagagtcgacgagcgtttggacaactagcgaaatgccacacatctctcactaatatttat
gaatcaattcttgagcaagaatcaagcccaataccgtttatagatgctacttactacaga
gtggggttttatggcgaacgatttgggaagctggatagaaaggaatatgtatacagggag
gcacgtgatgttcgtcttggtgatataatggaaaaacttagtcacatatatgagtcaaga
atggatggcactcatactttacatataatacctgactctagacaggtaaatgcagatgag
cttcaaccaggcgtttcctatctgcagataacagctgttgacccagtcatggaagatgaa
gatttgggcagcaggagggagaggatattttccctttctactggaagtgtgcgagctcgc
gtttttgatcgcttcttgtttgacaccccctttaccaaaaatggcaagacgcaaggaggg
ctagaagatcagtggaagaggaggactgttcttcaaactgagggctctttccctgctcta
gtgaatcgcctgctggttgtaaagtcagaatctatggaattttctccagttgaaaatgcc
attgggatgattgaaacaaggacagcagcactacgtgatgagcttgaagagccccgaact
tctgatgtggatcatctcccaaggcttcaaagtttacagagaatactccaaggcagtgtt
gcagttcaggtgaatagtggagttttgggcgtctgtacagcatttttatcaggtgaaccg
gcaaccaggcttagatcacaggagctacaacagcttattgcagctctacttgaatttatg
gccgtctgcaagcgtgccattcgagttcattcgaggttaataggagaagaagatcaggac
ttccacacacagcttgtcaatgggttccaatcactcactgctgaactatcacactatatt
ccagctatactttccgagctctga
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integrated database retrieval system
