Nymphaea colorata (blue-petal water lily): 116252726
Help
Entry
116252726 CDS
T07418
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116252726
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116252726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
116252726
NCBI-ProteinID:
XP_031483061
LinkDB
All DBs
Position
4:25248601..25269781
Genome browser
AA seq
445 aa
AA seq
DB search
MAMGHRMLGMVALVLVAVAMAGISGVSAGREERDLRGLSIEEHEAERERMQRMRPNITVI
NPVAEDPDAVAEMVSMSIRNSSTRRELGYLSCGTGNPIDDCWRCDPHWNRNRKRLADCGI
GFGRNAVGGRNGRYYVVMDPSDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIVLKEELI
MNSFKTIDGRGVNVHIANGACITIQYVTNIIIHGIHIHDCKPTGNAMVRSSPSHYGWRTM
ADGDGVSIFGASHIWVDHCSLSNCADGLIDAVMSSTAITISNNYFTHHNEVMLLGHSDSY
TKDKDMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNR
YLAPYNPFAKEVTKRVETADSVWKSWNWRSEGDLLLNGAFFTPSGMGASASYSRASSLSA
KSSSLVGTITAGAGALNCRWGASTC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgggccatagaatgctgggaatggtggccttggtgctcgtggccgtggcgatg
gctggaatctccggcgttagcgccggcagggaggagagagatctgagaggtctcagtatt
gaagagcacgaggcggaaagagagaggatgcaaaggatgagacctaacataaccgtgatc
aatccggtcgccgaggaccctgatgccgtggcagagatggtctcgatgagcatcaggaac
agctcgacgaggagggagctgggctacctttcctgcggcactggcaaccccattgacgac
tgctggaggtgtgatcctcactggaaccgaaaccgcaagaggctcgctgactgcggtatc
gggttcgggcgaaatgccgtgggcggccggaacggccggtactacgtagtgatggaccca
tcggacgacgaccccgtgaacccccggccgggcaccctccgccacgccgtcatccaggac
gagcccctctggatcgtgttcaagcgcgacatggtcatcgtcctaaaggaggagctcatt
atgaacagcttcaagaccatcgatggccgtggcgtcaacgttcacatcgccaacggcgcc
tgcatcaccatacagtacgtcaccaacatcatcatccacggaatacacatacatgactgc
aaacccaccggtaacgccatggtcaggagctcgcctagccactacgggtggaggacaatg
gccgatggagacggggtctccatattcggggccagccacatctgggtcgaccactgctcg
ctatccaactgcgccgatgggcttatcgacgcagttatgtcctcgaccgccatcaccatc
tccaataattacttcacccaccataatgaggtcatgctgttgggacacagcgactcttat
actaaggataaggacatgcaggtgaccatcgctttcaaccattttggagagggccttatt
cagaggatgcccaggtgcaggcatggatatttccacgttgtgaacaatgactacacccac
tgggagatgtacgctataggaggaagtgcagagcccaccatcaacagtcagggcaacaga
tacctggctccatataatcccttcgccaaggaggttaccaagagagtggagacggccgat
agcgtgtggaaaagctggaactggaggtccgagggcgacctgttgctgaacggagccttc
ttcacgccgtcgggcatgggagcttccgccagttactcgagggcgtcgagtctcagcgcc
aagtcctcgtcgctcgtgggcaccatcacggcaggggcaggggctctcaactgccgatgg
ggagcatccacctgctga
DBGET
integrated database retrieval system
