Nymphaea colorata (blue-petal water lily): 116252735
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Entry
116252735 CDS
T07418
Name
(RefSeq) protein transport protein SEC16A homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116252735
Membrane trafficking [BR:
ncol04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116252735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
116252735
NCBI-ProteinID:
XP_031483079
LinkDB
All DBs
Position
4:23458946..23467799
Genome browser
AA seq
1479 aa
AA seq
DB search
MDTSTILMEDQTDEDFFDKLVVGEFGISDCSTAGLKKDTDSDDTNNGLPFVSSFANLSLS
DSESLSEATTEEAAVGTAGSCEVRNSIGPDEDSQPSEDSAYSLTIQAKMESEGAVNGVDC
NGSESDFSFGKASRPAMTSVREVQWSSFLTKNAENDLGGFGSYSDLLTLNDTAVLAGDVQ
GSKFPSISSKPETGFINEKKHQVDATMDGQYPYQSVVSNNSYRSHSQREIAEQDSSRWES
NYKSDAQSYSTCAAQAADEQLEYSNEDWEKLYPGWKYDPAIGEWHQLDGYRGEPPTSHTN
ITDSLENSQENGLPNATVSNVLLNRTEFSHLQPTSQSVLGTIADECRTEEVSEQNQPFRG
NAGYPSHMFFYEQYPGWYFDTVTEKWHQLDGHFDQSTQMVGGDFEQVYNQNTYGDSVSCV
NALADTSSTISKEVSQTEEFAKQEQGSGCALSFGSYIHNDRQPGSFQPEVWSSDRGSSGG
ASKKIAADQQSNEYFLSHGRMHEPTADMRSYADQQVTFKIPETESSYGQATNSHENNASK
GSHHNLSFSKDAHGCDTSNVMQGYHNYHGPDYLGDEHKKKHFQAGHLSYASVPPNSAQGR
TSSGRPLHALVTFGFGGKLVVMKVNDLFNRSTTLENQDAAGGIVSVHNLMDVVVVKSGLG
SCESSNHDYFYSLCRQSFPGPLLGGNVANKDVHKWIDESIASCESHNIGYCKRESLLLLL
SLLKISCLHYGNLRSPFGAEAASQEIDGPESAVTKLFTSSRRNNMQLSEYGVGACKQCLQ
PLPSEEQMQSTAIEVQKLLVAGCRLEALQCAREGQLWGPALVLAGKLGDKFYVETVKQMA
HRQFISGSPLRTLCLLISGQQADVFSSETIGSPRQAAALSVSQLPAQNCATSMLDDWEEN
LAIMLANRTKDDELVIVRLGDCLWKETGKVTAAHACYLVAEANFESFSNTARLCLIGADH
WKMPRTYASPDAIQRTELYEYAKALGNSQFTLQTFQPYKLVYAHMLAEVGKVSESLRYCQ
AMLKQLKNAGHTADVETCKVLTSSLEERLRTHQQGGYASNLAPAKLMGKVLTSIDRSIHC
IIGAPLPPLPPVTEGSIQNGETDDGSAVLKMSNESSRTGITSLMPSSSMEPISEWSGDSN
RASVPTRSISEPAIGRSPKQGQNAQTSRTDAQGKASSTGSPTRLGRFGAHLLQTAISLVS
RRRQAKLGERNKFYYDEKLKRWVEEGVDPPAEAAELAPPPTTAAFRNDAVKSPSLSLDGV
IETKKLPASDSSSIPLMPPASMNQFSARGRLGVRSRYVDTFNKGGGVPVCTFQSSGLPSA
KPGGATAKFFIPTIAASVEVDTVHSAESIGSENNPEPAANETSTSSPSLSSPPPSLASSA
AHSIHPFPSMNDVNAASKEIAMLDQQSGLSPSQSRAASWGATYTDNLCNPMIGETRPSMD
MLGGPPFSSSEPPGRSLANNMSMSTSVPSFGEDLQEVEL
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggatacttctactattcttatggaggatcaaacggatgaagatttctttgacaagctt
gttgtcggtgagtttgggatctctgattgttccacagcagggttaaagaaggatactgat
tcagatgacaccaataacggcctaccgttcgtttcttcctttgctaacctctccttaagt
gattctgaaagcctttcagaggctactacagaggaggcggctgtgggaacggctgggtcc
tgtgaggttagaaactcaattggaccagatgaagatagtcaaccttcagaagatagtgct
tatagcttaactattcaagccaagatggaatctgaaggtgccgtaaatggggttgactgt
aatggttcagagtcagatttttcgtttggtaaagccagtcgacctgctatgacaagcgtg
agggaggttcagtggagcagtttcctcacaaaaaatgctgagaatgatcttggtgggttt
ggttcttactctgatcttttgactcttaatgatacagctgtactggcaggagatgtgcaa
gggagtaagttcccatcaatatcatcaaaaccagaaactggctttattaatgaaaaaaag
catcaagttgacgcaaccatggatgggcagtatccatatcaatctgttgtgtctaataat
tcttacaggtctcattctcaaagggaaatagctgagcaggactcaagtaggtgggaatca
aactacaaatctgacgctcaatcttacagtacttgtgcagctcaggcagcagatgagcag
cttgagtatagtaatgaggattgggaaaagttgtatcctggctggaaatatgaccctgct
ataggagaatggcatcagttagatggttacagaggagagccacctacttctcatactaat
atcacggatagcctggagaattcacaagaaaatgggcttccaaatgctactgtgagcaat
gtgctattgaataggacggaattttctcatcttcagccaacatcgcagtctgttctaggg
accatagcagatgaatgcagaactgaggaagtttccgagcagaaccaaccctttcggggt
aatgctgggtacccttcacatatgtttttctatgaacagtatccaggctggtattttgat
actgttactgaaaaatggcatcagcttgatgggcattttgatcagtccacacagatggtt
ggtggtgactttgagcaggtatacaaccagaatacttatggtgatagtgtctcttgtgtt
aatgcattggctgatacaagttccaccatatccaaggaagtaagtcagactgaggaattt
gctaagcaagaacaagggagtggctgtgcactgtccttcggtagctatatccataatgac
cgtcaaccaggttctttccagccagaagtgtggtcttctgacaggggttcttcaggtggt
gcttctaaaaaaattgctgctgaccagcaaagtaatgaatattttctttctcacgggcgt
atgcatgagccaacagcggatatgagatcttatgcagatcaacaggtcacttttaagatc
ccagaaaccgagtcctcttatggacaagcaaccaatagtcatgaaaataatgccagcaaa
ggtagtcatcataacttgtccttttccaaggatgcacatggctgtgatacatcgaatgtc
atgcagggctatcacaactatcatggccctgattaccttggtgacgagcataaaaagaaa
catttccaagcaggacacttatcctatgcttctgtccctcccaattctgctcaggggaga
acatcttcaggtcgtcctctgcatgctttagttacattcggatttggcggaaaacttgtg
gtcatgaaagttaatgatcttttcaacagaagcaccacacttgagaaccaggatgctgca
ggtggtatagtctcagttcataacttgatggatgtcgtggtggttaaatctggtcttgga
agctgtgaaagcagtaatcatgattacttctattccttatgccggcaatctttccctggc
cctcttcttggtggaaatgttgccaacaaggatgtacacaaatggattgatgagagcatt
gcttcttgtgaatctcacaatattggttattgcaagagggagtccttgctgttgttattg
tcattgctaaaaatatcttgtctgcattatggaaaccttcggtctccttttggtgctgaa
gctgcttcacaggaaattgatggacccgaatctgctgtgactaagctttttacatcttct
agaaggaacaacatgcagctgagtgagtatggtgttggtgcctgtaaacaatgtctgcaa
cctctgccttcagaagaacagatgcagtctactgcaattgaagtgcaaaaacttcttgtc
gccggttgccggttagaagctctccagtgtgcacgagagggtcagttatggggtcctgct
cttgtccttgctggaaagcttggtgacaagttttatgttgaaactgtgaagcaaatggcc
catcgccagtttatatctggatcacctctgcggacactatgcttgcttatatctgggcaa
caagctgatgtattttcttcagaaactataggtagtcccagacaagctgcagcacttagt
gtctcacagcttccagctcagaattgtgcaactagcatgttagatgattgggaagagaat
ttggcaattatgcttgcaaaccgaacaaaagatgatgagcttgttatcgttcgccttgga
gattgtctttggaaagagacaggcaaggtaactgctgctcatgcctgctacttagttgca
gaagcaaattttgagtcattttcaaacaccgctaggctctgcctaattggtgcagaccac
tggaaaatgccacgaacatatgctagtcctgatgctatccagagaacagaactgtatgaa
tatgcaaaagctcttggcaattctcaatttacattgcaaacttttcagccatataaactt
gtttatgcccacatgctagcagaagttggaaaggtttcagaatctttgaggtactgtcaa
gcaatgctgaaacaactgaaaaatgctggccacactgctgatgttgaaacatgcaaagtt
ttgacatcttccttggaagagcgccttcgaacccatcagcagggaggatacgcctcaaac
ttggcccctgcaaaactgatgggaaaggtccttactagcattgaccgatcaatccactgc
attattggtgcacccttaccaccactgccaccagtcactgagggcagcatacagaatggt
gaaactgatgatggatctgcagttcttaagatgtcaaatgaatcatcaagaacaggtatt
acatcactaatgccgtcatcctcaatggagcccatcagtgaatggtcaggtgatagcaac
agggcgtcagtacccactagaagcatttcagagccagccattggaagaagtccaaagcag
gggcagaatgcacaaacgtctcgaacagatgcacaaggaaaagcatcaagtactggcagt
ccaactcgcttgggtcgctttggtgcacaccttctgcagacagctataagcttagtttca
aggaggcgtcaggccaaacttggggaaaggaacaaattttattatgatgagaagcttaaa
agatgggtagaggaaggtgttgatccaccagctgaagcagctgaactggcaccacctcca
actactgctgcatttaggaatgatgcagtgaaaagtccaagcttatcacttgacggcgtt
attgaaacaaaaaaactgcctgcatctgatagttctagcattccactgatgcctccagcg
agcatgaaccagttttcagcacgtggccggcttggcgttcgttctaggtatgttgatact
ttcaacaagggtggaggtgttccagtatgcacgttccaatcttctggccttccatctgca
aagcctggtggtgctactgccaagtttttcattcccactatcgccgcttctgttgaggtt
gatactgttcattctgcagaatctattggaagcgaaaacaatccagaacctgctgccaat
gaaacttcaacatcatctccgtcattatcatcaccaccaccatcactagcatcatcagca
gcacattccattcaccccttcccgagcatgaatgatgtcaacgcagctagcaaagaaata
gctatgctggaccaacagtctggcctatctccgtctcaatctcgtgcagcttcatggggt
gctacctacaccgacaacttgtgtaatccaatgattggagagacgagaccatcaatggat
atgttgggcggtccacctttctcatcatcagaacctcctggccgttcgttggcaaacaat
atgagcatgtcaacgagtgtccctagtttcggggaagaccttcaagaagttgagctttaa
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integrated database retrieval system
