Nymphaea colorata (blue-petal water lily): 116252777
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Entry
116252777 CDS
T07418
Name
(RefSeq) U-box domain-containing protein 12 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116252777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116252777
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116252777
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
U-box type E3
116252777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
Arm_2
HEAT_EZ
ARMC9_ARM
zf-C3HC4_4
KAP
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
ELMO_ARM
INTS7_N
V-ATPase_H_N
zf-Nse
zf-RING_2
MLKL_N
Motif
Other DBs
NCBI-GeneID:
116252777
NCBI-ProteinID:
XP_049933448
LinkDB
All DBs
Position
4:complement(20282933..20288042)
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AA seq
636 aa
AA seq
DB search
MFPAGSEAPMSGSVPREMVESLASLVRDVSAIAENCRGPFRKQACDLARRVKLLGPLFDE
LREGEDSGCAGDGRIDVAGFVSLESALEAAKDLLRSTNESSKLFQGLQKGAISCRFNDVM
CQLEKALGGIPYSKLGLTAEVQEQIRLVHSQIKRAKERTEPYDNQLSLDLSSAMYEQETR
LDVLRRLSEKLQLYTMDDLKKESLALHEMVIHAGGDPVDHLEQMANTLKKLMDFTMETSD
PSDSGKGSWSSSSPVIPEDFRCPMCFELMQDPVIVATGQTYERSCIEKWIDAGLKTCPKT
QLTLSHTIITPNYALRSLITQWCESNGVKLPKKPGNCKPGKFGGCVSECDADIGPLLKRL
SSTRTEEQRAAAGELRLLAKRNADNRICIAEAGAIPLLVQLLSSSDPRTQEHAVTALLNL
SIHDKNKGNIVESGAIPPIVEVLKSGSMEARENAAATLFSLSVVDDYKVAIGNAGAIPAL
VDLLSVGSQRGKKDAATALFNLSIYQGNKVKAVKAGIVSHLMKLLEDVSAGMMDESLAIL
AILASNQEGKLAIGQAEPIPVLVDVIKTSSPRNRENGVALLLALCTSSEHHLTVALELGA
EEVLKELTESGTARAKRKAGSLLEHMHKFKAEQSAS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccgcgggatcggaggcgccgatgtcaggatcggtgccgagggagatggttgag
tcgttggccagtctcgtccgggacgtgtcggcgatcgcggagaactgtcgcggccctttc
aggaagcaggcatgtgatctcgccaggagggtaaagctgcttggccctctctttgacgag
ctgagggaaggggaggactccggctgtgccggtgacggccgaattgacgtcgccggtttc
gtctctctggaatctgccttggaagcggccaaggatctccttcggtccacgaacgaatcc
agtaaattgtttcagggtttacaaaaaggggctatttcttgcagatttaatgatgtaatg
tgccagctagagaaagctttgggtggaatcccctatagtaaattaggcttaacggccgaa
gttcaagaacagattaggctcgtgcattctcaaatcaaaagagcaaaagaaaggacagag
ccatatgacaaccaactttccctggatctgtcatcagcaatgtatgaacaagaaacaagg
ctagacgtactaaggaggctctccgaaaaactgcaactctatacaatggatgacctcaag
aaggagtctcttgctcttcatgaaatggttattcatgctggaggggaccctgtggatcat
ttggaacaaatggctaacacactgaagaagttaatggacttcacaatggaaacttctgac
ccgtctgacagtggtaaaggctcatggagtagttcatctccagtcatcccagaagatttt
cgttgcccaatgtgttttgagctgatgcaggatcctgtcattgttgcaacaggacagaca
tatgaacgttcatgtattgagaaatggatagatgctggacttaaaacctgccccaaaacc
cagttgacattatctcacaccattataacacctaactatgctttgagaagtttgattact
cagtggtgcgagagtaatggtgtcaagctaccaaaaaaaccagggaactgtaagcctgga
aaatttggtgggtgtgtctcagaatgtgatgctgatataggtcctttgttaaagcgttta
tcaagcacaagaacagaggagcaaagagctgctgctggtgaactgaggttactagccaag
agaaatgctgataacagaatatgtattgccgaagctggcgcaatccccttattagttcag
cttctttcatcttcagatccaaggacacaggagcatgcagtgactgcacttcttaatctt
tcaattcatgacaagaacaagggaaatattgttgagtctggggcgataccccccatagtg
gaggtgttgaagagtggaagcatggaagcaagggaaaatgctgcagcaacactttttagc
ctgtcagttgttgatgactacaaggtagcaattggtaatgctggggccattcctgcattg
gttgacttgctgtcagtggggagtcagagaggaaagaaagatgctgccacagctctattt
aacctgtcaatttatcaaggaaacaaggtgaaagctgtaaaggccggaattgtttcacat
ttaatgaagctcctggaggatgtgagtgctggaatgatggatgaatctctggccatattg
gccattcttgctagcaatcaggaaggtaaattggccataggacaggcagaaccgatacca
gtcctggtagatgtgatcaaaacaagttcaccacgaaacagggagaatggtgtggctctg
ctgcttgccctgtgcacaagcagcgaacaccacctaacagttgctcttgagttgggggcg
gaggaagtattgaaggaactgactgaaagcggcacagccagagctaagcgaaaggcagga
tcccttctggagcatatgcacaaatttaaggcagaacaaagtgcctcatag
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