Nymphaea colorata (blue-petal water lily): 116252854
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Entry
116252854 CDS
T07418
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncol03036
]
116252854
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116252854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
116252854
NCBI-ProteinID:
XP_031483307
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All DBs
Position
4:complement(23094611..23118949)
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AA seq
814 aa
AA seq
DB search
MMGLGKTLQAICFLSYLKFEQKIPGPFLILCPLSVTDGWMSEFATFSPNLKVMRYVGDKV
LRCLLRKKMLEHVSKRCKGNPTLPFDAFLTTYDIAILDQEFLSQMPWCFAVIDEAQRLKN
ASSVLYNVLKSQFVLPRRLLLTGTPIQNNISELWALLHFCMPLLFGSLDDFVEAFKEAGG
PVSGKNTSQFGALKYILKAFLLRRTKAMLTENGTLLLPPLTEITVLVPLVQLQKRVYVSI
LRRELPKILASSSGAPSQHALQNIVIQLRKACSHPYLFSGIEPEPFSEGEHLVLASGKLI
VLDKILQKLSAGNHHVLLFAQMTQTLDILQDFLELRRYTYERLDGSVRAEERFAAIRRFS
EQPSDRSSDSHLGQDDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHR
IGQIKHVLSINLVTSGTVEEVIMRSAASKLQLSQNVIGGEYVTNNGDTEANVENADLKSS
IVFGLDKFDPVDILEESFNDGNMSEVDSLAETVLQARFDDSGKKVDQGYEIGPMNVLDEG
KLRLERNYASASVDPGFDEASYVSWLEKFKDADMPSQSSSDTNLRKQLLAEKVSELEADK
QKKMEEKRLRKWEALGYQSLAVEEPPQSIGENALSDSGSVEFVFGDCTKPAKRCPSEPTV
IFSCVDNSGIWGRGGMFDALLNLSSIVPDSYKKASECSDLHLGDLHFVRINGTNEEEKDE
AVGDGPQWVALAVVQSYNPRRKVPRSNISMPDLEKCIRKACFSAARLSASIHMPRIGYQD
GSERTEWYTVERLLRKYASAYGVKIFVYYFRRFA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtcttggaaaaacgttgcaagctatttgttttctgagctatttaaaatttgaa
cagaaaatacctgggccttttttgatattatgtcctctcagtgtcacagatggttggatg
tcagagtttgccacattttcaccaaatcttaaagttatgcgatatgttggtgacaaagtg
ctgcgttgtctcctgcgcaagaagatgctagaacatgttagcaagcgatgtaaaggcaat
ccaactttaccatttgatgccttcttaacgacatatgacattgcaatactggatcaggaa
tttctttctcaaatgccctggtgctttgcggtaattgacgaagctcaacggctcaagaat
gcatccagtgtcttgtataatgttctcaagagccagtttgttctgccaaggaggctgttg
ttgacaggaacaccaattcaaaacaatatttctgagctttgggctttattgcatttttgt
atgccacttctgtttggatcactggatgattttgttgaggcgttcaaggaagccggaggt
cctgtttcaggcaaaaacactagtcaatttggagcattgaagtatatactgaaagcattt
ttgttgcggaggacaaaggcaatgcttacggaaaatggcaccctcttactgccacctctg
actgagatcactgtgttggtgcctcttgtgcaattgcaaaaaagggtttatgtatcaata
ctgaggcgggaacttccaaaaattcttgcatcctcatctggtgctccaagtcaacatgct
ttacagaacattgttattcagcttcgaaaagcttgcagccatccatatctcttcagtgga
attgaaccggaaccattttctgaaggtgagcatttggtgctggctagtggcaaacttatt
gttctagacaaaatacttcagaagctctctgctggaaaccatcacgttctactgtttgcg
cagatgactcaaacacttgacattcttcaggattttttggagctgaggaggtacacctat
gaacgcctggatggatctgttcgtgcagaagagaggtttgctgcaataagaaggttcagt
gaacaaccatcggacaggtcttctgattcacatcttgggcaagatgatgcatttgtattt
atgatttccacaagagcgggaggtgttgggctaaatctggttgccgctgatactgttata
ttctatgagcaggattggaacccacaagtggataaacaggctttgcagcgtgctcaccgc
attggccagatcaaacatgttctgtcgattaacttagtaacttctggcaccgttgaggag
gtaattatgagaagtgcagcaagtaaattgcaactcagccagaatgtaattggtggagag
tatgtcaccaataatggtgacacagaggcaaatgttgaaaatgcggacctcaaatccagt
atagtttttgggttagacaagtttgatccagtggacatacttgaagagagtttcaatgac
ggaaatatgagtgaagtggattccttggctgagactgtcttacaagcacgcttcgatgac
tcaggcaaaaaagttgaccaggggtatgaaattggaccaatgaatgtgctagatgaaggt
aagttacgtcttgaaagaaattatgcatctgcaagtgtagatcctggatttgatgaggcc
tcatatgtttcatggcttgagaaatttaaagatgctgacatgccttcacaaagctcttct
gacacaaacttgaggaaacagttattggcagaaaaggtttccgagcttgaagcagataag
cagaagaagatggaagagaaaagattaagaaaatgggaagcccttggttatcagtcttta
gctgtggaggaacctcctcaaagcatcggtgagaatgctttatcagattctggatctgtt
gaatttgtcttcggagattgcacaaagccagcaaagagatgtccatctgagccaactgtc
atttttagttgtgttgataactctggcatatggggcagaggtggaatgtttgatgcactg
ttaaatctctcttctattgtccctgattcatacaagaaagcttctgaatgttcagacctt
catttgggtgatcttcattttgtcagaatcaatggaactaatgaggaagagaaagatgaa
gcggttggtgacggtccacagtgggttgctcttgctgttgtacagtcatataacccccgg
cgtaaagtgccgcgcagcaacatatctatgcctgatttggaaaagtgcatcagaaaagct
tgtttctcagctgcccgtctttcagcatcaatacatatgcctcgcatcggatatcaggat
ggatcagaacgtacggaatggtatactgttgagcgactcctaagaaaatatgcatcagct
tatggtgtaaaaatttttgtgtactactttcgtcggtttgcatga
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