Nymphaea colorata (blue-petal water lily): 116252872
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Entry
116252872 CDS
T07418
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5 isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116252872
Enzymes [BR:
ncol01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
116252872
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
Other ribosome biogenesis factors
116252872
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
Methyltransf_31
PCMT
Ubie_methyltran
FtsJ
RsmJ
Cons_hypoth95
TRM
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
116252872
NCBI-ProteinID:
XP_031483338
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Position
4:complement(12019393..12069667)
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AA seq
547 aa
AA seq
DB search
MRREGERMEAEDGRRRRRRGSGSSGVKRIQDAKGQERSSYFARREAARVLRCVLRGDAQR
KAVASIKTLVYSPSVRNKKATFALVCQTLKHLPLIKKIVAATDILTGKLKRQEELVYIIA
YDILFGQAMTSIGVAEYSVLSKKDVLLSALAQICKQENVKCYKDLLIPVHKNPDFPNLRF
VRVNTLKMDVDAAVSELEKEYKVIKDVLVPDLLALPSGVDLHNHPLVTSGSIFLQGKASC
MPAVALGPQPGWEVLDACSAPGNKAVQMAALMRGTGRIVACELNKERVKLLEETVKRSGA
PNVEVSHVDFLKINSKSPLYSKVRAILLDPSCSGSGTSTNRLDYLLPSYDTGHFHNGLDA
ERARKLSAFQKKALAHALSFPSVERVVYSTCSIHQEENEDVIKTILPIAESLNFHLEAPF
PQWPRRGLPVFGGAEHLLRIDPADGMEGFFIALFVRKHSQNKQEELKCEKYTSSVDCISE
ARESKVLNLTNRQSGFRNLPEKIKHSTAKKNFRMYTYVKVPRAMYFLCMTKRKKLKRKQH
CEMHCSC
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgagagggagagagaatggaagcggaagatggaagaagaagaagaagaagaggg
agcgggagcagcggagtgaagaggattcaggacgcaaaggggcaggagcgctcttcttat
ttcgctcgaagggaggcggctagggtgctgcggtgcgttctccgaggggacgcccagagg
aaggctgtcgcctccatcaagacccttgtttacagcccttccgtccgcaacaagaaggcc
accttcgccctcgtctgccagaccctcaaacatcttcccctcataaagaaaattgtggca
gctactgatattttgacaggaaaattgaagcggcaagaggaacttgtctacataattgcc
tatgatattctctttggacaggctatgacttcaataggagtcgcagaatattcggtcctt
tcaaagaaagatgttctactgtcagctttggcacaaatttgcaagcaggaaaatgtgaaa
tgctataaagatttgttaattccagttcataaaaatccagattttccaaaccttcgattt
gttcgtgttaatacactgaaaatggatgtagatgcagctgttagtgagcttgagaaagaa
tataaggtgattaaggatgtcttggttccagatctattggcccttccatcaggagtagat
ctgcacaatcatccattggtgactagtggaagcatcttcttgcaaggtaaggctagttgt
atgcctgcagttgctcttggtcctcagcctggatgggaggtcctggatgcttgttcagca
cctggtaacaaagctgttcagatggcggcacttatgagagggacaggaagaattgtagca
tgtgaactgaacaaggaaagggtgaagctcctagaagagacggtgaaacgttcaggagcc
cctaatgttgaagtttctcatgttgactttctaaagattaatagcaaaagtcccttgtat
tcaaaggtccgggctattcttttggacccttcatgctctgggtctggaacctccaccaat
cgcttagattatctgcttccatcatatgacacaggtcattttcacaatggtctagatgct
gaacgtgctcgaaagctttctgcattccagaagaaggccttagcccatgctttgtccttt
ccttctgttgagagggtggtctatagtacatgctccatccatcaggaggaaaatgaagat
gttatcaagacaattctcccaattgctgagtccctcaattttcacttggaggcacccttc
cctcagtggcctcgccgtggtcttcctgttttcggtggtgcggagcatttattaaggata
gacccagctgatggcatggaaggatttttcatagcattatttgttcgaaagcattctcag
aataagcaggaggagctgaaatgtgagaaatacacttcatctgtcgattgtatttcagaa
gcgcgtgagagcaaggtgttgaatttaacaaataggcaatcagggtttagaaatcttcct
gaaaagataaaacattcaacggcaaaaaaaaatttccggatgtatacatatgtcaaggtg
cctcgagctatgtactttttatgtatgaccaaacgtaaaaaattaaagaggaaacaacac
tgtgaaatgcattgtagttgctaa
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