Nymphaea colorata (blue-petal water lily): 116252904
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Entry
116252904 CDS
T07418
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116252904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116252904
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
Pre-60S particles
RNases
116252904
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RNase_T
Phosphodiest
Motif
Other DBs
NCBI-GeneID:
116252904
NCBI-ProteinID:
XP_031483382
LinkDB
All DBs
Position
1:complement(603939..627278)
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AA seq
622 aa
AA seq
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MQSRASAPSSSFLPRCFPTVKGKKPSSVSMGKKKRASDRDADTQLINCTASSSSSSTSTS
SSSSSSSSSHSPSDSIGKEDNGRYFDVYGPEAKAEATIRSPRANSTLNLEDVQGLVTWVL
GEGVMPSWIFIKNKPLISKVVLLYVPGLDASLYMSQSCLLNGLKNCCGHPMPVLALSCIL
DGMQTIDALLTCKQKRKYREICSEIQTSEASMKRDDIPTGKKAKEPPFPASYYTLTEREM
EENGYCCMQPGFVSTLSAPAGSSFYDMLAVDCEMCVTTKGLELTRVTIVDKEGQVVLDKL
VKPSNSIVDYNTRFSGITCEMLSAVTTTLQDVQEEFLKLVCKDTILVGHSLENDLLALKI
SHKMVIDTAILYKHPRGAHFKSALRVLARKFLSREIQKSASGHDSVEDARAAMDLVLLKI
KYGPELGSHTPVLRKKLVSLLSENGQTSSLIDDSSVLKRYAIGPCHAISVVSDEDALGKA
KKELNNERINFIWAQFSELNSYFTKQAKDDKKLGAQIAEMISLMTCNDNSGHKSLVESCI
TPELKEILTRLDTRIQSLYNALPTNSLFILSTGHGNIAIVQRLRQMLRDDSDQTVCRDKL
TKVLAELQAQAEVALCFVSVRH
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcacgggcctccgctccctcctcttccttcctgccgcgttgtttcccgacggtg
aaggggaagaagccttcctcagtctccatggggaagaagaagcgcgcttctgaccgagac
gccgatacccaactcatcaactgtaccgcttcctcctcttcctcttctacttccacttct
tcttcttcgtcttcttcttcgtcttcgcattctccttctgactccatcggcaaggaggac
aatggccgttactttgacgtctatggccctgaggcaaaagcagaagctactattagaagt
cctcgggctaactcgactttaaatctggaggatgttcaagggcttgtcacctgggtcctt
ggagaaggtgtcatgccatcatggatatttataaaaaataagccacttatctcaaaagta
gtgctcctatatgttccaggccttgatgcatcactatacatgtcacagtcatgtttactc
aatggcctgaaaaactgttgtggacatccaatgccagttttagctttgagttgtatacta
gatggaatgcagacaattgatgcgcttttgacttgcaaacagaaaagaaaatatcgggag
atatgttcagagattcaaacatctgaagcatctatgaaacgagatgatatacctactggg
aaaaaggcgaaagaacctccatttccagcatcttattacactcttacagagagggaaatg
gaagaaaatggatattgctgtatgcaaccaggttttgtttcaactctttctgcacctgca
ggttccagtttctatgacatgctggctgttgactgtgaaatgtgcgtcacaacgaaaggc
ctggagcttacaagagtgacaattgtcgacaaggaagggcaggtggtgcttgataagctg
gttaagccttctaacagtattgttgactataacacaagatttagtgggataacttgtgaa
atgctcagtgctgtgactacaactctacaagatgttcaggaagagtttctaaaacttgtt
tgcaaggataccatacttgttggtcattcgttagagaatgaccttttagccttgaagatc
tcacataagatggtgatagatacagctatcctctataagcatcctcgtggcgcccatttc
aaatctgcacttcgagttcttgcaaggaagtttctttctcgagagattcaaaaatctgca
tctgggcatgatagtgttgaagatgcaagagctgccatggacttggtgttgctaaagatc
aaatatggtcctgaattaggttcccacaccccagttttgaggaagaaattggtctcactt
ttaagtgaaaatggtcagacttcttctctaattgatgatagttctgtgctgaaacgttat
gcaattgggccatgccatgcaatctctgtcgtttcagatgaagatgctcttggaaaggca
aaaaaagagttaaacaatgagagaattaatttcatttgggcccaattctcagagttaaat
agctactttaccaagcaagcaaaggatgataaaaagctaggtgctcaaattgcggaaatg
atctctttgatgacctgcaatgacaactctggacacaagagcttggttgaaagttgtatc
acacctgaactcaaggaaatactaactcgcttggacactagaatacagagtctttataat
gcattgcctacaaattctctgtttattctgtcaactggtcatggaaatatcgccatcgtc
cagaggttgcggcaaatgcttcgcgatgatagtgatcagacggtatgtcgtgacaaactg
acaaaggttttagctgaactccaggcccaagcagaggtggctctatgctttgtatctgtc
aggcactaa
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