Nymphaea colorata (blue-petal water lily): 116252980
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Entry
116252980 CDS
T07418
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116252980
03012 Translation factors [BR:
ncol03012
]
116252980
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116252980
mRNA cycle factors
Stress granule specific factors
116252980
Translation factors [BR:
ncol03012
]
Eukaryotic type
Initiation factors
eIF-4
116252980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
116252980
NCBI-ProteinID:
XP_031483513
LinkDB
All DBs
Position
4:21541888..21557223
Genome browser
AA seq
2009 aa
AA seq
DB search
MSLNQSRVERAEQHTRKSGRSSGPGHQRGFHNANAVKSGAAGAGSSAPPPPSSSSSSSSS
ASANRSFKKSNGQGGQSRVSNIATNSEANISRGLQNGTLLHNQKPVVPLPGPSGMANPDV
TKQVDHSHPKNAQPPRVPTSHSGAASSESTSIASPSGDASKMFPLQFGTITPGFMNGMQI
PARTSSAPPNLDEQKRDQARNDSRPSPVPVAVATKQQQKQHLQPPQLQQQQQQHPRRDLG
AKVTNVAEPNQPSQPRRDATVLQTPVPPQTSSAKPSVLPLAGGSISIPFQQPQVTTQYST
PNSQQSQSVSAGSLQMPLPLSVGNPTQVQQPLYVHGLQSHPLQAQGMIHQSQGLGYAPQM
NHQLGPQLGNMGISVAQFPQPTVNKFVTPRKAVKITDPKTHEELRLDKRTDSFTDTSSSG
QTVQLSRSHAAVATQTQQPIPSFSSTHPINYYTPMQPNSYTPSIFYAGQPTHPLANAQVA
PGSSATRYGYPVSHGGPTVSVANPVALGTSLPQSRSGLSSQANSDTINVEVITAPAASVQ
VTVKPPPTGSLPGKVGISTSTPSGDSSSGKKGAVVQTEPVKMSRHQESGASHLQRSTEGA
RLISSAMGEILAQSSSTTVSSAVVGDAGPGSCIEQPKSASGMPSPLNTLHATVKSPASSA
ATVEERQLFTVSSVNPITLTEDPANILTNPEGRKWDPLKKSDSFKDQQKLNRKELQQSES
ENQICNSAGKQKSSSVVSSKISEMNSEHGSRTDESKPGVLDGTLTSTPRLSSFKLENSRP
SEVVEVPETKDDKTLLASSGRSVTELEVTEGPINSETTSSVPSDAVPVEAVAEAVSPVKL
LHSDPSEVVVTIPKSSVSGDLVPHDLGTRGEASGASGLEDSISKTPTTKLETQENMSLVG
CSGNSQSTDASLHQVPVVDKVEEISVQIDSLKVELEDTVEEVSDSSLSRPSDEALGVDVD
KEESMGVSAIASHTVSDSAETENLPPSAHLTRGDYEKQNERESKMSIEEIESPAESTSSS
RESATAVPEGTQEHESSRGSENLNSGVSPSTLSTSRDKMPLEQSRPKSVSGKKKKKRELL
SKADAAGTTADLYMAYKTPEEKRDVAVSENVNTMSSNIDGKQMPEGDTKKHASSKEEDSH
SKSELDDWEEAAEISSPKLKTLERSEAVHNNKCCMEHDSGSVGGKRYTRDFLMTFSEQCK
DLPPGFEIGSDIADLLINVQLNAPFVDRDTYHMGGRIFDRQPSGSSRLDRRGSGNMEEDR
WNKLTAPFVPGRTDLAYGIAGTTFRQGPGGNLGVLKNPRGHPGGQYVSGILSGPMQSLGS
PGGLPRMHADADRWQRAPPVQKGLIPSPHAQPVVMHKAEKRYEVGKVSDEEETKQRQLKS
ILNKLTPQNFEKLFGQVKEVNIDNVVTLTGVISQIFDKALMEPTFCEMYADFCSRLAGAL
PDLVEGNEKVTFRRLLLNKCQEEFERGEKEEAEADKDEEEGETKQSAEEREAKRIKARRR
MLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCKLMSTIGAIIDHPIA
KEHMDAYFDRMHKLSTNQKLSSRMRFMLRDTIDLRKNKWQQRRKVEGPKKIEEVHRDAAQ
ERQTQSGRASRGSGMSSSARRGQAIDYGPRGSTGLSSPGSQPLVSLRGTPASGRFGTQDV
RLEDRHIIESRTLSVPLPQRSIDDDSITLGPQGGLAKGMSMRGQPSMSSGSVNDISVVST
GDARRMGMCLGGSSSTHSLAEWTPNNSREEVGSRGVLLDRPKSAHSYGQPNHEDRVNRDA
RNTPVSSTGPHNSIDKLPEEQLREKSISAIKEFYSANDEEEVASCVKELNAPNFYPTMVS
LWVTDSFERKNIERDRLTKLLVSLCKSRNHLLSQRQLINGFESVFATLPDAIYDAPKAPE
FLGGILAKVILENIISLKDVGRLIHEGGEEPGSLTESGIASDVLGSILEVIKEEKGDTLL
KDIRKNSEIRLEEFLPPDPRKQAKLIAFI
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaatcaatctagagtggaaagagccgagcagcacacccgcaaatctggaaga
tctagtggacctgggcatcagaggggcttccacaacgccaacgcggtaaagagtggcgcc
gccggcgcgggctcttccgccccccctcctccatcttcctccagttcttcgtcgtcatcg
gcaagcgccaacaggagttttaaaaagagtaatggacaaggagggcagtcaagggtgagc
aacattgcaacaaattctgaagcgaatataagccgtggattgcagaatggaacactcctg
cataaccagaaacctgtggttcctttgcctggaccctctggaatggcaaaccctgatgtc
actaagcaggtcgatcactctcatccaaaaaatgcacaacctcctagggttcctacttct
cattctggtgctgcttcatcagaatcaacatcaatagcttctccatcaggagatgcctca
aaaatgtttccgcttcaatttgggaccataactccaggtttcatgaatgggatgcagata
cctgcacggaccagttctgcaccgccgaatttggatgagcaaaaaagagatcaggcacgc
aatgatagtcgacctagccctgtacccgtggcagtcgctaccaaacagcagcagaagcag
caccttcagccaccacaactgcagcagcaacagcagcagcatcctagaagggacttaggt
gccaaagttactaatgttgctgagccaaaccagccttcccagcccagaagggatgccact
gtacttcagactccagtaccacctcaaacctcttcagctaagccttctgttctgcctctt
gcggggggttccatttctataccttttcaacagcctcaagtaacgacacaatacagcact
ccaaattcccaacagtcacagagtgtttctgctggctcacttcaaatgccgttgcccctt
tctgttggaaatcctacacaagttcaacagccgttatatgttcacggattacaatcccat
ccattgcaggcacaaggtatgattcatcagagtcagggactgggttatgcaccacagatg
aaccatcagcttgggcctcaattgggtaacatgggtatcagtgtggctcaatttcctcaa
ccgactgttaacaaatttgttacaccacgcaaggcagtcaagataactgatcctaaaact
catgaagaattgagactggataagagaactgattcttttactgatacatcatcctcaggg
cagacagttcagctttctagatctcatgctgctgttgctactcaaacccagcaacctatt
ccttcattctcttccacccatccgatcaattactacactcctatgcaacctaattcttat
actccgtcaatcttttatgctggtcaacctacccatcctttagctaatgcccaggtagct
cctgggtcttcagctacaaggtatggctatccagttagccatggtggcccaactgtatct
gttgcaaaccctgttgcactgggtacctccttgcctcaatctaggtctgggctatcatca
caagctaattcggacactataaatgtagaagtaattactgctccagcagcatctgttcag
gtaacagtgaagccacctccaacaggttcacttccaggaaaagttgggatctccacttct
acaccatctggtgattcttcttctgggaagaaaggtgctgttgttcaaactgaacctgtt
aagatgtcaaggcatcaggagtctggcgcctcacatttgcaaaggtctactgagggggca
agactgatttcatctgccatgggagagatattagcacagtcttcatcgacaactgtttct
tcagcagtggttggtgatgctggccccgggagttgtattgaacagccaaaatctgcttct
ggaatgccatcacctcttaatacattacatgccactgttaaaagtcctgcatcatctgct
gcaactgtcgaagagagacaattattcactgtttcttcagttaatcctattaccttaact
gaagatccagcaaatatcttaacgaatcctgaaggtcgcaaatgggatcctcttaaaaag
tcagattcctttaaggatcagcagaagctgaacagaaaggagctgcagcagtccgagtca
gagaatcagatctgtaactctgctggtaaacagaaatcttcctctgtggtgtcatcaaaa
attagtgaaatgaattcagagcatggttccagaacagacgagtccaaaccaggtgtgttg
gatgggaccctgacctctactccacgtctttcatccttcaagttggagaatagcagacct
tcagaagttgttgaagttccagaaacaaaagatgataaaactttattggcttcatctgga
agatccgtcacagaattggaagtgacagaaggaccaataaattctgagactaccagctct
gttccatctgatgcagtgccagttgaagctgttgcagaggcagttagtcctgtgaagctc
ttgcattctgatccttctgaagtagtggtaactattccaaaaagttcagtttcaggggat
ctggtccctcatgatttgggcacaagaggcgaagccagtggtgcatcagggttggaagac
agtataagcaaaacacctactaccaaactagaaactcaagaaaatatgtctcttgttgga
tgttctggtaatagtcagagcacagatgcaagtttgcaccaggttccagtggttgacaaa
gtggaagaaatatctgttcaaatagacagtttgaaggttgaactagaagatacggttgaa
gaggtatcagattcttccttgagtcgtccttctgatgaagctttgggagttgatgtagat
aaggaagaaagcatgggtgtttccgctattgcttctcatacagtttcagattctgcagaa
actgaaaatttgcctccttcagcacatttgactagaggtgattatgaaaaacaaaatgaa
agagagagtaaaatgtctattgaagagattgaatcaccagctgaatccacaagctcaagt
cgagagtccgccactgctgtacctgaagggacacaggaacatgaatcttctaggggttca
gaaaacctaaatagtggtgtgagtccaagtactttgtcaacctccagggataaaatgcca
ttagaacagagcaggccaaagagtgtttctggaaaaaagaagaagaaaagggagcttctt
tccaaggctgatgctgctgggacaactgctgatctttacatggcatacaaaacaccggaa
gaaaagcgagatgttgctgtatcagaaaatgtgaataccatgtcttcaaacattgatggt
aagcagatgcctgaaggtgatacgaagaagcatgcctctagcaaagaggaagacagccat
agcaaatctgaactggatgattgggaggaagccgctgaaatctctagccctaaattgaaa
accttggagaggtctgaagcagtgcacaataataagtgctgcatggaacatgacagtgga
tctgtaggtggaaaaagatacaccagagatttcctaatgaccttctcagagcagtgtaag
gatcttcctcctggatttgagattggatcagatatagcagatcttctaataaatgttcaa
ttgaatgcaccctttgttgaccgtgacacgtaccatatgggtggaagaatatttgataga
caaccaagcggctcatctcgactggaccgtcgtgggagtgggaacatggaagaggatagg
tggaataaattaacagctccttttgtacctggacgcacagaccttgcatatggtattgca
ggtacaacatttcgtcaaggtccaggtggaaacctgggggtcctgaagaatcctcgtggc
catccaggaggacaatatgttagtggaatcctttctggtcctatgcagtctcttggttct
cctggtgggctgccaagaatgcatgctgatgctgataggtggcagcgtgctccccctgtt
cagaagggcttgattccctctcctcatgctcaacctgtggtcatgcacaaagctgaaaag
aggtatgaggttggcaaagtatctgacgaagaggaaactaagcagagacaactgaaatcc
attcttaacaagctgactcctcaaaattttgaaaagctgtttgggcaagtcaaagaagtt
aacattgataatgttgtcactcttactggtgttatttcccaaatttttgataaagcatta
atggagccaacattctgtgaaatgtatgctgatttttgttcccgtcttgctggagcatta
cctgatctggttgaaggtaatgaaaaggttactttcagaagattgcttctgaataaatgc
caagaggaatttgagaggggagagaaggaggaagcagaagcagataaagatgaggaagaa
ggcgaaacaaaacagtctgcagaggagagagaagcaaagcggatcaaggctcgcagacgg
atgctgggtaacattcggctgattggtgaactgtacaagaaaaagatgttaactgagaga
attatgcatgaatgcatcaagaagctactgggccagtatgagaatcctgatgaagaagat
gtggaagctttgtgcaagttgatgagcacaattggagcaataattgatcatcccatagcc
aaagagcacatggatgcatattttgataggatgcacaagctgtcaactaatcaaaagcta
tcttctaggatgcgatttatgctgagagacacaattgatctcagaaagaacaagtggcag
cagagaagaaaagttgagggccctaagaaaattgaggaagtgcatcgtgatgcagctcag
gagcgccaaacacaatcaggaagagcatctcgtggttctggcatgagttcttctgcaagg
agaggacaagccattgattatggacctagaggatccactggcttgtcttctccagggtca
cagccactggtttctcttcgagggacgccagcatctggtcgctttggtacccaagatgtt
cggctggaggatagacatattattgagagcagaacactttcagttccattgccacaaagg
tctatagatgatgattcaattactcttgggcctcaaggtggtcttgcaaaggggatgtct
atgagagggcaaccctcaatgtcaagtgggtctgtaaatgatatttcggtagtgagtact
ggagatgcaagaagaatgggaatgtgtctaggtggttccagttccacacattctctagca
gagtggacaccaaataattcacgggaggaggttggttctaggggtgttctgcttgatagg
ccgaagtctgcacattcttatggtcagccaaatcatgaggatcgtgtgaacagggatgca
agaaatactccagtatcttcaactggtccacataactcaatagacaaattgcccgaggaa
cagctaagagaaaagtcaatatctgcaatcaaggaattttacagtgcaaatgatgaggaa
gaagttgcttcatgtgtgaaggaattgaatgcgccaaatttctatcccactatggtgtct
ctctgggtcacagattcttttgagcgaaagaacatagagagagaccgtttaacaaaatta
cttgtttctctctgcaaatcaaggaaccatttgctgagtcaacggcagctcatcaatggg
ttcgagtctgtctttgctaccttgcccgatgcaatatatgatgcgcctaaagcacctgaa
ttccttggtggcattcttgcaaaggtgattttagaaaacattattagtctaaaggatgta
ggaagattgatacatgaaggaggtgaggagcctggtagccttacggaatctggaatcgca
tcagacgtccttggtagtattctggaggttataaaggaggagaaaggtgatactttgttg
aaagacatccgcaaaaattctgagattcgactggaggaattcctccctccggaccctaga
aagcaggcgaagctcatagcctttatttag
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integrated database retrieval system
