Nymphaea colorata (blue-petal water lily): 116253019
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Entry
116253019 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116253019
KO
K03267
peptide chain release factor subunit 3
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116253019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116253019
03012 Translation factors [BR:
ncol03012
]
116253019
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116253019
Translation factors [BR:
ncol03012
]
Eukaryotic type
Release factors
116253019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
116253019
NCBI-ProteinID:
XP_031483585
LinkDB
All DBs
Position
4:complement(23389251..23401926)
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AA seq
531 aa
AA seq
DB search
MDDIQASLRELGLEPNAKENEHDGSENFEELREKDEELEQHPNVVDGDHVADGGHVDTVE
NVQSGMHTVEPEPNEYENEVAAPENVEEEEEEEKEVNKKRHLNVVFIGHVDAGKSTCGGQ
ILFLSGMVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTR
FTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVT
KLVVVVNKMDDSTVKWSKDRFDEIESKMIPFLRSSGYNVKKDVQFLPISGLVGSNIKTRL
EKSVCGWWNGPCLFEVLDTVEVPPRDPKGPLRMPIIDKFKDMGTVVMGKIESGSIREGDN
LLVMPNKASVKVLGLYCDENKVRRAGPGENVRVRLSGIEEDDILGGFVLSSISKPISAVS
EFDAQLQILELLDNAIFTAGYKAVLHIHSIVEECEIVELLQQIDPKTKKPMKKKVLFVKN
GAVVVCRIQVNNLICIETFSDFPQLGRFTLRSEGKTVAVGKVTGLRPSGST
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgatatccaggcaagcttgcgtgaactggggttggaaccaaatgcaaaagagaat
gagcacgatggttcagaaaattttgaagaactacgcgagaaggatgaggagctagagcaa
catccaaatgttgtagacggtgatcatgttgcagatggtggtcatgttgatacggtggag
aatgtccaatctggtatgcatactgtagaaccggagcccaatgaatacgaaaatgaagtt
gctgctccagaaaatgtggaagaggaagaggaagaggagaaggaagtgaataaaaagaga
catctgaacgtggtatttattggtcatgttgatgctggcaaatcaacatgtggaggacag
atattattccttagtggtatggttgatgatcgaacaatccaaaagtatgagaaggaagca
aaggacaaaagcagggaaagttggtatatggcatatatcatggacacaaatgaggaggaa
cgaataaaggggaagacagtggaggttggaagggctcattttgagacagagacaacgaga
ttcaccatcttggatgctccaggccataaaagttatgttccaaacatgataagtggggct
tctcaggcagatattggagttctggttatatccgcgcgaaagggtgagtttgagactgga
tatgagagaggcggtcaaacacgtgaacatgtccaacttgcaaagacattaggggttact
aagttggttgttgttgtcaataaaatggatgattcgactgtgaagtggtccaaggaccga
tttgatgaaattgagtcaaagatgataccttttttaagatcttctggctacaatgttaag
aaagatgttcaatttcttccaatatctggtctggttggttcaaacataaaaactaggttg
gaaaaaagtgtgtgtggatggtggaatggaccttgcctttttgaagttcttgatactgtt
gaagttcctccacgagatccaaagggtccactgaggatgccaataattgataaatttaaa
gacatggggacagttgttatgggtaagatagagtctggatctatccgtgaaggcgacaat
ctgttggtcatgcccaataaggcgagtgtgaaagtgctgggcctatattgcgatgaaaat
aaagtgaggcgtgctgggcctggtgaaaatgttcgtgttaggttatcaggaatcgaggag
gatgatattttgggcgggtttgtcctttcaagtatctcaaagccgatttctgctgtctca
gaatttgatgctcagttgcagatactggaattgcttgacaatgctattttcactgctggc
tacaaggctgtgttgcatattcattctattgttgaggagtgtgagatagtggagctgttg
caacaaatagatccaaagacgaagaagcccatgaaaaagaaagttctctttgtaaaaaat
ggtgcagttgtggtttgccgcatccaggtgaataacctgatttgcattgagaccttcagt
gattttccccagctcggaaggtttactcttcgttctgaaggaaaaaccgttgcagtaggc
aaagttactggtcttcgtccatcaggcagtacctga
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