Nymphaea colorata (blue-petal water lily): 116253218
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Entry
116253218 CDS
T07418
Name
(RefSeq) single-strand DNA endonuclease 1 isoform X2
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116253218
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116253218
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_SEND1
XPG_N
Chromo_2
XPG_I_2
fvmX6
Motif
Other DBs
NCBI-GeneID:
116253218
NCBI-ProteinID:
XP_031483845
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All DBs
Position
4:complement(18948176..18962936)
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AA seq
545 aa
AA seq
DB search
MGVNKLWEILESCKKTVPLNHLQNKRLCVDLSCWIVQLHSVSRRHHINGDKPFLRGLFHR
LRALIALNCTIILVADGSIPALKLSTYRKRLGSTGDNVQDEATLERKTSLKRNLGSEFSR
MIKDAKDLGISLGIPCLDGIEEAEAQCALLNSCGFSDGCFTADSDVFLFGARTVYRDIYL
GEGGYVICYEMNEIESKLGFGRNSLITLALLLGGDYSQKVHGIGQETACQLVKSIGEENI
LQQTMSQGLAFAKKKDVGKSSDKSLIANVSMEDKQCWDMKNMDERQNPKLDEHSQSVINA
YLRPNCHSPESVEVQRVLGQLHFQRDQLHLLCAQSFGWPPDKTDEYILPKIAERDLRRLA
NLRAISYDLGIQAPMPRLPVGYRVASILKHRKLNGVECFEVSWGGEPKVRPSIVPASVLR
SACPEMLSDFASKGAKKQNPCKARRKQSENEKLVLDEVETQLKDLVLHGEYQSIDMNGAN
SCIIDLSTPSPPIHMHKHGACKSNVLQVDVIDLSESDEERPLTDHERRGRELRTFLASIK
EDLSS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaacaaactctgggaaatcctggaatcctgcaagaagactgtccctcttaac
cacctccagaacaagcggctgtgcgtcgacttgtcgtgctggatcgttcaactccacagt
gtgagccgacggcaccacataaatggggacaaaccgttcctcagaggcttgttccaccga
ctcagagccctcatcgccctcaattgtaccatcatcctcgtggctgatggatccattcct
gcactcaaattatctacttataggaaaagattggggtcaactggtgataacgtacaagat
gaggcaactttagagagaaagacttcactcaaaagaaacttgggttctgagttttcacgc
atgataaaagatgccaaagatctaggcatttcccttgggatcccatgtttggatgggata
gaggaagctgaagcacaatgtgcattgttgaactcttgtggcttttctgacgggtgcttt
actgctgactcagatgtcttcctttttggtgctagaacagtgtacagggatatttatcta
ggggaaggtggctatgtgatttgctatgaaatgaatgagatagaaagcaagcttggattt
gggaggaactcgctgatcactttagctcttcttcttggtggtgactattctcaaaaggtt
catggaataggccaggagaccgcatgtcagcttgtaaaatcgataggagaagaaaacatc
ctccagcagacaatgtcacagggtttagcatttgctaagaaaaaagatgttggtaaaagt
tcagataaatctctgattgcaaacgtgagtatggaagacaaacagtgctgggacatgaaa
aatatggatgagaggcaaaacccaaagttggatgagcattctcagagtgtgattaatgca
tatttgaggcccaattgtcactcaccagaatcagttgaggtgcaaagagtgcttggtcaa
ctacatttccagcgtgatcaacttcatctgttgtgtgctcagtcctttggatggcctcct
gataaaacagatgaatatatcctccctaagattgctgaaagagatcttaggcgactggca
aacctgcgagctatttcttatgacctagggattcaagctccaatgccaaggttacctgtt
ggctatcgtgttgcttccattctaaagcataggaaacttaatggagtagaatgttttgag
gtttcttggggaggagagccaaaggtcagaccatctattgttccagccagtgtgttgagg
agtgcttgcccagaaatgctgtccgatttcgcctccaaaggagccaagaaacagaaccca
tgtaaagcaagaagaaagcaatccgagaatgaaaaattggtactggacgaagtagaaact
cagctcaaagacttggttcttcatggtgaatatcaaagcattgatatgaatggtgcaaat
tcttgtatcattgacctttcgaccccatctcctcccattcatatgcataagcacggcgct
tgtaaatctaacgttcttcaagttgatgtaattgatcttagtgagtcagatgaagagagg
ccattaacagaccatgaaagaagaggtagagagttgcggaccttcttagccagtataaag
gaagatctttcaagctga
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