Nymphaea colorata (blue-petal water lily): 116253430
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Entry
116253430 CDS
T07418
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncol03016
]
116253430
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
116253430
Transfer RNA biogenesis [BR:
ncol03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
116253430
Prokaryotic type
116253430
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
116253430
NCBI-ProteinID:
XP_031484101
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Position
1:29152245..29158873
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AA seq
993 aa
AA seq
DB search
MSRMPPVSGLRLFFSTSPLLIPKPKTPLIPLRPFPPPRFTVLCASFGKKTQFPRRFSTLR
NPKTREKPPQMEEKEKEGVGFNKRRAEGKDKGQPKNLQLKSRKLNPVNTICYVQILGTGM
DTQDTSPSVLLFFDKQRFFFNAGEGLQRFCTEHKIKLSKIDHIFLTRVCSETAGGLPGLL
LTMAGIGDDGMSVNMWGPSDLKYLVDAMRTFIPNAATVHTHSFGPAPGSISGLLKDPIIL
VNDEVVKISAIILCPALSGTNESIDQVDNGSDVTGFDFERNLDDFSKYPSLSPPGSPKKA
SLATKPGDLAVVYMCELPEIKGKFDPAKAMALGLKPGPKYRELQLGNTVMSDRKNIMVRP
SDVLGPSIPGPVVILVDCPTLSHVHGLVSVPSLKKYYVDSTDPDWGSSKPVNCVIHLGPA
SVTSTESYRKWMSRFGGAQHIMAGHEMKNVEIPILKASARIASRLNYVCPQLFPTNGFWT
VGNIDSCPMDSISSSKEVLQCIPSENLLKFHLRPYANLGLDKSGIPPSPKPSYFINELLS
EIPEIEDASKVVRKFWECPTEKAGNNSFPVEEPWISEASVEEVQYQKGNENMSFEDVSQI
PASLENISREDMEIVLLGTGSSQPSKYRNVSSIYINLFARGSLLLDCGEGTLGQLKRRFG
MKGADDAIKSLKCIWISHIHADHHTGLARVLALRSQLLRHEPHEPLLVIGPRQLKRFLDA
YSMLEDLDMQFLDCRQTLEISKDVSKKSLETVSTHDILQQGNGSRENGIAGSGSLTMADG
GNPLQTLEGTLFVKSKMQSYWKKSGFQGDAVVDTAGLEKLRSLLEDSGLEALISVPVVHC
PQAFGLVLKAASRINSTGKTIPGWKLVYSGDTRPCQALIDASRGATVLIHEATFEDSLLE
EAIARNHSTTKEAVQVGESAGVYRVILTHFSQRYPKIPVVDETHMNTCIGFDMMSVNVAD
LPVLPKVMPFLKLLFRNEMVADETDESLTAESY
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaatgccccccgtctcaggcctcaggctcttcttctcgacttctcctctgtta
atccccaaacccaaaacccctctcatccctctccgacctttcccgccacctcgcttcacc
gttctctgcgcatcattcggcaagaaaactcagtttccgagaaggttttcaactctcaga
aacccaaagaccagagagaaaccgccacaaatggaagagaaagagaaggaaggcgtcggt
ttcaacaaaaggagggcagaagggaaggataaaggccaaccgaagaatctccaactcaaa
agcagaaaattaaatcctgtcaatactatctgttacgttcagattttgggaaccggaatg
gatacacaggacacttcaccatcggttttgctgttcttcgataagcaacgcttttttttt
aatgctggagagggcttgcaacgtttctgcacggagcacaagattaagttgtctaagatt
gatcacatattcctcactcgtgtttgctctgaaactgctggtggtcttccaggactttta
ttgacaatggccggcattggtgatgatgggatgagtgttaatatgtggggtccatctgat
ctcaagtatctggtggatgcaatgcggacctttattccaaatgctgctacagtgcacact
catagttttggacctgcacctggctcaatctccggcctacttaaagatccaataatcctc
gtgaatgatgaagttgtcaagatatcggcaattatcttgtgcccagctttgtctggaact
aacgaaagtatagaccaggttgacaatggttcagatgttactggttttgactttgaaaga
aatctggatgacttctccaagtacccatctttgagtccacctggatctcctaaaaaagca
agtttggctacgaaacctggtgatttggctgttgtttatatgtgtgagttacctgagatc
aaggggaagttcgatccggcaaaagctatggcccttgggctgaaaccagggccaaaatat
cgtgagctgcagcttgggaacactgttatgtctgatcgtaaaaacataatggtgcgccca
agtgatgtactcggtccatcaattccaggaccagttgtcattctagtggactgcccgaca
ctatctcatgttcatggattggtttcagttccatctctcaaaaagtattacgtggactca
actgaccccgattggggtagctctaagcccgtgaattgtgttattcacttgggtcctgct
tctgtgacaagtacagagtcctacaggaaatggatgtcaagatttggtggggcacaacat
atcatggctggacatgaaatgaaaaacgttgaaataccaatcctcaaggccagtgcaagg
atagcgtcgagactgaattatgtgtgtccacagctcttccctacaaatggattctggact
gtagggaatattgacagctgtcccatggattcaatttcctcaagcaaggaggttctccag
tgcatcccgtcagaaaatcttttaaagttccacttgcgtccttatgcaaatcttgggtta
gataaatctgggattccaccgtctcctaaaccttcatatttcataaatgaactcctttca
gaaattcctgaaattgaagatgcttcaaaagttgttaggaagttctgggagtgcccaaca
gaaaaggctggaaacaattcattccctgtggaagagccatggattagtgaggcatctgtt
gaggaagttcagtaccaaaaagggaatgagaacatgtcttttgaagatgtgtcccagatt
ccagcttctctagagaacatatcaagagaggacatggaaatagtcctcttgggcactggt
tcgtcacagccatccaagtatcggaatgttagttctatctatatcaatcttttcgccaga
ggaagtctgcttctagattgtggtgaaggaaccttagggcagttgaagagaagatttggt
atgaagggtgctgatgatgctataaaaagtttgaagtgcatctggatttcccacatccat
gcagatcaccacacagggctagcaagggtcctagcactccgatcccaattgttgaggcat
gaaccccacgagccacttctggttattggaccaaggcagctgaagaggtttttggatgct
tactctatgttggaggatcttgatatgcagttcctagattgcaggcagaccttggaaatc
tcgaaggatgttagtaagaagtcccttgagacagtaagcactcatgatatcttgcagcaa
ggaaatggttctcgggaaaatggtattgctggttcaggaagcttaactatggctgacggt
gggaatccacttcaaacgttggaagggaccttgtttgtaaagagtaagatgcaaagctac
tggaagaaatcaggcttccagggagatgcagtggttgacactgctggcttggaaaaacta
agaagcttattggaggattcaggcttagaagcactgatcagtgttcctgttgttcactgc
cctcaagcatttggacttgtcttgaaagctgcaagtagaattaattcaaccggcaaaact
atacctggttggaagcttgtttattctggtgatacaaggccatgtcaagctcttatagat
gcttctcggggggcgacagtgttgatacatgaggcaacttttgaggatagtctgctcgag
gaagccattgccagaaaccatagcacaacaaaagaagcagtacaagtgggagaatctgca
ggcgtgtacagggtaatccttacgcattttagccagcggtaccccaagattcctgtggtt
gatgagacacacatgaacacatgtattggctttgatatgatgagtgtgaacgtggcagac
ctccctgttctcccgaaggtcatgcctttcctcaagctcttgtttaggaatgaaatggta
gctgatgaaactgatgaatcgctgaccgctgaatcatattaa
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