Nymphaea colorata (blue-petal water lily): 116253478
Help
Entry
116253478 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116253478
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncol03016
]
116253478
Enzymes [BR:
ncol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
116253478
Transfer RNA biogenesis [BR:
ncol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116253478
Prokaryotic type
116253478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Fumble
Motif
Other DBs
NCBI-GeneID:
116253478
NCBI-ProteinID:
XP_031484162
LinkDB
All DBs
Position
4:complement(18304945..18307708)
Genome browser
AA seq
591 aa
AA seq
DB search
MEGRERMEVEEAGNPSTAPTPEPQTKKIKMSSTTTTEDEAEEQSTVPTGDGATKRVRFKR
RKIALFLAYCGVGYQGMQRNPGAKTIEGDLELALLKAGAIPEADYGDPRRVDWMRSARTD
KGVSAVGQVVSGRFYVDPPGMIERLNSHLPPQIVAFGYKRVTASFNAKKFCDRRRYIYLL
PVFALDPTAHPDRESVLASEGSDNALAKCLECSERGRKVVGAMGGRRTDSNANKANGVLV
GADEVEVNRKLQRPEVVSESEGMAKNGVSANSIEEEEEAGNSSAISLGEKENGTVSSSET
LMLNDVPLDDAKSSSKAGSAEKHKAIIEQFPSSERVVKDSMDSGEEDKAGALPVLEQEEN
SNSVENKQQETDTDGDRQRIKCIEEGSSSFHYGDKEKEQFNRILKMYVGTHNFHNLTTRT
KAEDPSAKRYIVSFEANEVVTVDGIDFVKCVVVGQSFMLHQIRKMIGLAVAVMRGCAPES
IITTALRRDLNLNVPTAPELGLFLDECLYTSYNQKWRDTHEELSLAGYAEQAEVFKMKHI
HAHIASTEHKEGVVALWLHSLNHRNYPDFRIEHGNGGINTEDGKQCKTDPQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagggaaaggatggaagtggaggaggcagggaacccttcaactgcaccaacc
ccagagccccaaactaagaagatcaagatgtcttccaccactaccaccgaagatgaagcc
gaagaacagtccaccgtccccaccggcgacggcgccaccaagagggtgcggttcaagcgg
cggaagatagccttgttcctggcgtactgcggtgtgggttaccaggggatgcagaggaac
cctggggcgaaaaccatcgagggcgatctagagctcgcgctcctcaaggccggcgccatc
cctgaggccgactacggcgacccccgccgcgtcgactggatgcggtctgcccgcaccgac
aagggcgtaagcgccgtcgggcaggttgtttccggccgtttttacgtcgacccacctggc
atgatcgagcgcctcaactctcacctcccccctcagatcgtcgccttcggctacaagcgc
gtaacggcctccttcaacgccaagaaattctgcgaccggcggcggtacatctacctcttg
cctgtgttcgccctcgacccgacggcgcaccccgatcgggagagcgtgctggccagcgag
ggatccgacaacgcgctcgccaagtgtttggagtgctctgagcgagggaggaaggtggtt
ggtgctatgggtggccggcggaccgacagtaacgcgaataaggctaatggggttttggtg
ggcgcagacgaggttgaggtaaacaggaagcttcagcgtcctgaagtcgtgtctgaatcc
gaggggatggcaaaaaatggggtctctgcgaattcgatagaagaagaagaggaagctggg
aacagcagtgcaatctctctgggagagaaggaaaatggaactgtttccagttctgagaca
ttgatgctaaacgacgttcctttggatgacgcgaaatcgtccagcaaggcaggctccgca
gaaaagcataaggctataattgagcagttcccatcctcggaaagggtggtaaaagattct
atggactctggagaagaagataaagctggggccttgcccgtgctcgagcaggaagagaat
agtaattccgttgagaacaaacaacaggaaacagatacggatggagatcggcagcgtatt
aaatgcattgaggaagggagcagttccttccattatggtgataaggagaaagagcaattc
aatagaatcctaaagatgtatgttggtacccataactttcacaatctaaccacgcgaacg
aaggcggaagatccgtctgcgaagcgctacattgtgtcatttgaggcaaacgaagttgtc
actgtcgatggtattgattttgtgaaatgtgtggtcgtggggcagagcttcatgcttcat
cagatccgcaagatgatcgggcttgcagtggcagtcatgcgaggctgcgctccggagtcc
ataataacaactgctttgagaagagacctgaatctcaacgttccgacagcaccggagctg
ggtcttttcctggatgaatgtctatatacatcctacaaccagaagtggagggacacacac
gaggagctgtctttggctggatatgcagaacaggcggaggttttcaaaatgaagcacata
catgctcacattgcatcaactgaacacaaggaaggtgttgtagctctttggcttcactct
ttgaaccaccgcaattatcctgacttccgaatagaacatggcaatggaggcattaacact
gaagatggtaagcagtgtaaaacggacccgcagtag
DBGET
integrated database retrieval system
