Nymphaea colorata (blue-petal water lily): 116253562
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Entry
116253562 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116253562
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116253562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116253562
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116253562
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
INTS7_N
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
116253562
NCBI-ProteinID:
XP_031484287
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Position
4:complement(19770833..19774009)
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AA seq
401 aa
AA seq
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MGESDEELMVEQDHPWEDRTLNLLQDSKIDEELSGGKKNQKVWKKHKLKWMKRPMGIPDV
ILEIRGEDIRENALRCLSNFLLEKREEDPENYHRSGFLLFHSFGTMAILLQEVIDATMKM
VNGNLGVRDSRRLTNVLTLFQAVAANTETRFSFVQSHIPDFIIPLILFESREEMTDNVRA
ISLSVIGILCQAREPEIIQWAIENNIVDVCDTAIRISSELCKVIAMHILEAILQDSKGIL
YICDPHSDQQLRRLIERMIILVDVLSVNQDSSPRLLFHIIRCFVLLCTHTRGFTAVVESL
PVALMNNSFQEIMEEFPIIGKLHEQLLLSIGKATDVSLLPTGEGCEQTRETKTNWRSDAI
GASASASEESPLLRPIDLNRTDWSRLPDAHCPFMLHSGKEN
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggggagtctgatgaggaactgatggtcgagcaggaccatccatgggaagaccgaaca
ctgaacctccttcaagactccaagatagacgaagaactttcgggaggcaagaagaatcag
aaggtctggaagaagcacaagctgaaatggatgaagaggcccatgggcatccccgacgtg
atattggagatccgaggggaggatatcagagagaacgcacttaggtgcctgagcaatttc
cttcttgagaaaagggaagaagatcctgagaactatcataggtcgggcttcttgctgttc
cattcatttggcaccatggcaatcttgttgcaggaagtaattgatgcaaccatgaagatg
gtgaatggaaatcttggcgtcagagactccaggaggctaaccaatgttctcaccctgttt
caggctgtagctgccaacacggagaccaggttcagttttgtgcaatcacacataccagat
tttatcattcctctcatattatttgagagtagggaagagatgactgacaacgtgcgagct
atctccctttctgtcattgggattctatgccaggcaagggaaccggagatcattcaatgg
gccattgagaacaatattgtggacgtctgtgacactgcaattaggattagcagtgaactc
tgcaaagtgatagcaatgcacatacttgaagcaatactccaggacagcaagggtatcttg
tacatctgtgatcctcattccgatcagcaactgaggaggttaattgagagaatgatcatt
ttggtcgatgttctctctgtgaatcaagactcctctccacgtttactcttccacattatc
aggtgttttgtgcttctctgcactcataccagaggtttcactgctgtcgttgaaagttta
cctgtcgctctcatgaataactcatttcaagagatcatggaggagttcccaatcataggg
aaacttcatgaacagcttctactgagtattggaaaggcaactgacgtttctctgctgccg
actggtgaaggatgcgaacaaacaagagagacgaagaccaactggagaagtgatgctatt
ggcgcttctgcctctgcatccgaagaatcgccgctactgcgaccaatagacctgaacaga
accgattggtcgcgattgcccgatgctcattgcccattcatgttacattcgggcaaagaa
aactag
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