Nymphaea colorata (blue-petal water lily): 116253815
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Entry
116253815 CDS
T07418
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116253815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116253815
03036 Chromosome and associated proteins [BR:
ncol03036
]
116253815
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
116253815
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
116253815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Ge1_WD40
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
RMC1_N
Beta-prop_RIG_1st
CFAP43_N
Beta-prop_VPS8
WDR54
PD40
Motif
Other DBs
NCBI-GeneID:
116253815
NCBI-ProteinID:
XP_031484622
LinkDB
All DBs
Position
5:complement(15839381..15854229)
Genome browser
AA seq
459 aa
AA seq
DB search
MATGADAASPLSSTKIRPHTLLQERIVSRNAPCRPQYDRFIPNRGAMDLDVAQYLMVDSK
KEKPVGILSPSQEAYRKRLAEVCLKNRTRILAFRSKPPEPTENIPWEVSSSPQHSRTVKP
RRYIPQSAERTLDAPELEDDYYLNLLDWSTRNVLAIALGRSLYLWDASEGTASELMSVDE
DSGPITSVSWAPDGKHIAVGLKSSAVQLWDTVASKQLRTLRGGHQSRVGSLAWNSHILTT
GGMDGLIFNNDVRIRSHIVEEYKGHEQEVCGLKWSSSGQQLASGGNDNLLHIWDRTMASE
QNARQNQWLHRLDDHRAAVKALAWCPFQGNLLASGGGGSDRCIKFWNTHTGSCLNSVDTG
SQVCALLWSKTERELLSSHGFDQNQLTLWKYPSMVRMAELTGHTSRVLFMAMSPDGCTVA
SASAGDETLRFWNVFGNPETNKKPVSKPLGPFASVNSIR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccactggtgcggatgccgcatcgccgttgtcatctaccaagattcgcccacacact
cttcttcaggagcgcatcgtctccagaaacgcgccctgccggccgcagtacgacaggttt
attcccaacagaggagccatggatcttgatgttgctcagtatttgatggtggattcgaag
aaagagaagccagtaggcattctatcaccatcacaggaagcatataggaagcggttagcg
gaggtctgcctaaagaacaggaccaggatccttgctttcagaagcaaacctccggagcct
actgagaatattccatgggaagtttcttcatcaccgcagcattctaggaccgtcaagcct
cgcagatacattcctcagtctgcggagagaactctggatgcacctgagctggaggatgac
tactacttgaatttgcttgattggagcaccagaaatgttttggcgattgctcttgggcgc
tctctctatctctgggatgcatcagaaggtactgcttccgagctcatgtcagttgatgag
gacagtggcccaattacaagcgttagctgggctcctgatggtaagcatatagccgttggt
ttgaagagttcagcagttcagttgtgggacacagtggcaagtaagcagttgagaactcta
cgaggtggtcatcaatcaagagttggttctcttgcatggaattctcacattcttacgact
ggtggaatggatggtttaatatttaataatgatgtgcgcattcgatctcatatagttgaa
gaatacaaaggacatgaacaagaagtttgtggattaaagtggtcaagctcaggccaacaa
ttagccagcggagggaatgacaaccttctgcacatctgggatcggacaatggcatcagag
caaaatgctagacagaatcaatggctacacaggctggatgaccatagggctgcagtgaaa
gcattggcctggtgcccattccagggaaatctacttgcatcagggggtggtggcagcgac
cgctgcattaagttctggaacactcatactggatcctgcctgaactctgtagatacgggt
tcacaagtttgtgcactcttatggagtaaaactgaaagggaacttctcagttcgcacggg
tttgatcagaaccagttgacattgtggaaatatccatcgatggttaggatggcagagcta
accggtcatacttcaagggttttgttcatggctatgagtccagatgggtgcactgtggca
tctgcctctgcaggagatgaaacattgcgattctggaatgtttttgggaatcccgaaaca
aacaaaaagccagtcagcaagccacttgggccatttgcaagtgtcaatagcataaggtga
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