Nymphaea colorata (blue-petal water lily): 116253884
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Entry
116253884 CDS
T07418
Name
(RefSeq) coronatine-insensitive protein homolog 1a
KO
K13463
coronatine-insensitive protein 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116253884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116253884
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116253884
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
116253884
NCBI-ProteinID:
XP_031484722
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All DBs
Position
5:3171078..3178222
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AA seq
585 aa
AA seq
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MNNRSLSRAPSFGISDIALQWVMGYVDDPHDRSAISLVCKKWKNIDALTRKHVTIALCYS
TTPERLRDRFPNLESLELKGKPRASMFNLIPENWGGYAGPWVREISNAFHCLKFLHFRRM
IVLDEDIEVLVRGRGHMLQALKLDKCSGFSTEGLLHIARSCRCLRTLFFEESYITDKGNN
WLHELAQNNSVLEVLNFHMTDLNVNVKDLELLARNCPSLVSLKVSDCEILDLDNFFRTAE
KLEEFGGGSFNNQAGQTNQYENVYFPPNLSVLGLIYMGTNEMSVIFPCASSLRKLDLQYA
FLDTEGHCQLIQRCPNLEVLEVRNVIGDRGLEIVAQHCKKLRRLRIERGDDEQGLEDEQG
MVSQRGISAVARGCPELEKLAVYVSDISNDALVCIGTYSKNLCDFRLVLLDKEERITDLP
LDNGVRALLRGCEKLRRFALYLRPGGLTDVGLGYIGKYSANVRWMLLGYVGETDSGFLEF
SKGCPNLVKLEMRGCFFSERALALAVLQLASLRYIWVQGYKTSTAGRDLLLMVRPFWNIE
IIPPRPAQDGVEQPSQILAYYSLAGKRTDCCETVVPLSPSLFGSP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccggagtttgagtcgagcgccgagcttcggcatatcggacatcgctttgcag
tgggtgatgggatacgtggatgatcctcatgacaggagcgcgatttctctagtctgtaag
aaatggaaaaatatcgatgccttgacgagaaagcatgtcacaatcgctctctgttattca
acgacaccggaacgcctccgcgaccgatttccaaatctggaatcgctggaactgaagggc
aaaccacgagcgtcgatgttcaatttgatacccgagaattggggcggatatgctgggcct
tgggtcagagagatctcaaacgcgtttcactgcctcaaatttctccatttcaggcggatg
atagtgttggacgaggatattgaagtgttggttcgaggccgcgggcatatgctccaggca
ctaaagctagataagtgctcgggtttttctacagaggggctcttgcatattgctcggtct
tgcaggtgtctgagaaccttattttttgaagagagttatattactgataaaggtaataat
tggcttcatgaacttgcacagaacaactcagttctggaggttttgaactttcacatgaca
gatctcaatgtcaatgtaaaagatcttgaattgttggccaggaactgtccatcattagtc
tctttgaaggttagtgactgcgagattttggatcttgataatttctttcggactgctgag
aagttagaagagtttggaggtggttcttttaataatcaagccggacaaactaatcagtac
gagaatgtctattttcctcccaacctgtccgttttgggtcttatctacatgggcacaaat
gaaatgtcagttatatttccttgtgcttcatcactcaggaagttggatctgcagtatgcg
tttctcgacacagagggccattgccaattgattcaacggtgtcccaatttagaagttctt
gaggtgagaaatgtgattggggacaggggattagaaattgttgctcaacattgtaagaaa
ctacgtaggctcagaatcgagcgtggggatgacgaacaaggcttggaggatgaacaaggg
atggtttctcaaagaggcatatctgcagttgctcgtggctgcccagaactagaaaagctg
gctgtatatgtatctgatataagtaatgatgcactagtatgcattgggacatacagcaaa
aatctatgtgattttcgccttgtcttgcttgataaagaagaacgcataacggatctgcca
ctagacaatggtgtacgagccttattaagaggctgcgaaaaactcaggagatttgcactt
tatttacggcctggaggcttgacggatgttggtcttggatatattggaaagtacagcgct
aatgtcagatggatgctgttgggctatgtgggtgaaaccgactctggattcctggaattc
tccaagggttgtccaaatctcgtgaagcttgaaatgaggggttgtttctttagtgagcgt
gcgttggctcttgctgttttgcagttagcatctttgagatacatctgggttcagggctat
aaaacatcaacagcaggcagagatctgctgctcatggttcgaccattctggaacattgaa
attataccgccaaggcctgcacaagatggtgttgagcagccctctcagatattggcttac
tattcacttgctggtaagagaacggactgttgtgaaacagttgtcccgttgtctccatcc
ttgtttggatctccataa
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