Nymphaea colorata (blue-petal water lily): 116253898
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Entry
116253898 CDS
T07418
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116253898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncol03032
]
116253898
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116253898
DNA replication proteins [BR:
ncol03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
116253898
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
116253898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
116253898
NCBI-ProteinID:
XP_031484748
LinkDB
All DBs
Position
5:23075560..23088097
Genome browser
AA seq
1286 aa
AA seq
DB search
MAESPTAFSDNANPPGSIFLGVRFVLCGFDQPDEVQFRDALVDGGAVDVGRYDSTCTHVI
VHRLTRDDPVCVVAWRDGKIVVTETWVGDSLDLGRPADANRVLYMPVKDLDGIPKFREIH
ICLTGYQKQERYDIMRMVELVGAKFSKPLVATKVTHLICYKFEGEKYVLAKKIGIKLVNH
RWLEDSLRAWDKCPEDEYSKSSWELEIVDAEAGDSEEESENMRYGRPSNQRKIGGDGSYM
NKWHGDVMTAGKAYEMQYNNGTVQVSSSTPNKMLANAPLTRKSTPDKGAVDGRISDEASK
MVEIQYDNEAIQASLSTPNKVLENAALLPIQRKTTPDKGNGGRPEGILGTENFGGSLVKA
NGHVVEHAFERTPIAEHGERAAGYYDISKVISGINISNQTPYSDSSDKRTPPSCSSRTSK
LSCASYLSKDPSNRLSIPHQNSHGERSISPPASKQIADDFDAFEVTGINGQVSGKTDTLT
VNQVHVMADNGVALARAEEKPQNKSTELKSVGSEDGSSCSPAVDAHNFLKNNLESSVCNP
VKTHSVETAQDRIADPPPKKLLSFRRNSTKRLTAFSTSPADTLQAKVSELHVKDQTAFSG
KVDGANMPPIEGYVTQGGGSLEMNSNQGGTKSLLFIDSGSISDQANNNAHMSTSLIPLNG
QNNESKETNCSRVELLSSDHNFSPEKNQTGESAEACENEMNGSSSKNPSIKITKKFVARK
NTSKRHGINDMTPFDAKCGLSSGEEPITGNLTNGAVQSQADAQHEPLEGKKNFEIGLTLT
AGKVLQIEQGNNRPSAQRPSNKTKRKSAVMIENDVVIDDEEKHSTKYKQYNAKNQVCDGE
KNVSKFEHANEPNVFALRSAEGRENIEKFLGPTANNMQHIGRKNSRLEVPKSSSNLKRKS
RVVSETNLAADKENQPNETESQNIDNVKKHSTGKIVSKSTQVKSKRGGVNSEGKIDASKV
GKMSTSKQFEPQWFILSGHHLQRKEFQQVIKNLRGRICRDSHHWCYQATHLIVPDPLRRT
EKFFAAAAAGRWILKTDYLTASSQAGKFLNEEPFEWYKTGLSEDGAINLESPRKWRLLRQ
RTGHGAFYGMNIIIYGECIAPSLDTLKRVVKAGDGSILATSPPYHRFLKSHVDFAIVSPG
MPRVDAWIQEFLAHNVPCVLADYLVEFVCKPGFSLDRHVLYNTYAAAEKSHANHLQRLEV
IEVPTQEDDIVCSVCKLNDRAEVMLICGDDAGKVGCGVAMHIDCCDPPLDSVPEDDWFCS
KCCSSVSMKGAKNSSVLKRKSSLHVK
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcccgactgcattttccgacaatgcaaatcctccggggtctatcttcttg
ggcgtgcgattcgttctgtgcggcttcgatcagccggacgaagttcagttccgggatgcg
cttgtggacggcggggctgtcgacgttggacggtacgattctacctgcacgcacgtcatt
gtgcatcgactcactcgcgacgatccggtttgtgttgtggcgtggcgtgatgggaaaatt
gtcgttacagagacgtgggttggagatagccttgatcttgggaggcctgctgatgctaat
cgtgttctatatatgccggtaaaagatttagatgggataccaaagtttcgagaaatacac
atttgtttgactggttatcagaagcaagaacgatatgatattatgagaatggtggaactg
gtgggtgcaaaattcagcaagccattggtagcaaccaaagtaacgcaccttatctgctac
aaatttgaaggtgaaaaatatgtccttgctaagaagataggaattaaacttgttaatcat
cgctggttggaggacagtttgagggcatgggataagtgtccagaagatgaatatagtaag
agtagctgggaattggaaattgtagatgctgaagctggagactctgaggaagaatctgaa
aacatgcgctatggtagaccatcgaatcagagaaagattggtggagatggtagttacatg
aataagtggcatggagatgtcatgacagctggcaaagcatatgagatgcaatataacaat
ggcacagttcaggtctcatcatctacacctaacaaaatgctagccaatgcccctttaaca
agaaaaagtactcctgataaaggtgctgtagatggtaggatttctgatgaagctagcaaa
atggttgagatacaatatgacaatgaagcaattcaggcttcattatctacacctaacaaa
gtactagaaaatgccgctctgttacctatccaaagaaaaactactcctgataaaggcaat
ggagggcgtcctgaaggaatattaggcactgaaaattttggaggttctttggtaaaagcg
aatggccatgttgtggagcacgcctttgaaagaactccaattgcagaacatggtgaaaga
gctgcaggttattatgatatcagtaaagtgatttctgggataaatatttctaaccaaacc
ccttattctgattcctcagataagagaactccaccaagttgctcttcgagaacatcgaag
ttatcttgcgcttcatatttgtctaaagatccttcaaataggttaagcatccctcatcaa
aattcacatggagaaagaagcatctcacctccagcttcaaaacaaattgctgatgacttt
gatgcctttgaggttacaggaatcaatggacaggtctcaggtaagactgatacattaact
gtgaatcaagttcatgttatggctgacaatggtgttgcgttggcaagggcagaagaaaaa
ccacaaaataagtcaactgaacttaaatcagtgggcagtgaagatggaagctcttgcagt
ccagctgttgatgcacataattttttaaagaataatttggaaagtagcgtgtgcaaccct
gtcaaaacacactctgtagaaactgctcaggatagaatagctgatccacctccaaagaag
cttttgagtttcagaaggaattcaacaaagcgattaactgcattttcaacaagtcctgct
gatactctgcaagcaaaggtttctgaacttcatgtgaaggatcaaactgccttctcaggt
aaggtggatggggccaatatgcctcctattgaaggttatgtaacacaagggggaggctca
cttgaaatgaattccaatcagggaggcactaagtcattattgttcatagattctggatct
atatctgatcaggcaaacaacaatgcacatatgagtacatcattgattcctttgaatggt
caaaataatgaatccaaagaaactaattgcagccgtgtggaattgttatctagtgaccat
aatttttcacctgaaaaaaatcaaaccggtgagagtgcagaggcatgtgaaaatgagatg
aatggatcttcttccaagaacccttctatcaagattaccaaaaaatttgtggccagaaag
aacactagcaaaaggcatgggataaatgacatgactccttttgatgccaaatgtggcttg
tcttctggtgaggagccaatcaccggcaaccttacaaatggtgcagtgcaatcacaggct
gatgctcaacatgaaccattggaaggaaagaaaaactttgagataggtcttactttaaca
gccggtaaggtcctgcagattgagcaagggaataataggccaagtgcacagaggccttca
aacaaaacaaagagaaaatctgcagttatgattgaaaatgacgtggttattgatgacgag
gaaaaacattctactaaatataaacagtataacgcaaagaaccaggtttgtgatggtgag
aagaatgtctctaaatttgagcatgcaaatgaaccaaatgtttttgctcttagaagtgca
gaagggcgagaaaacattgagaaattcctgggtccaacagcaaataacatgcagcatatt
ggcagaaaaaatagtagattggaagtgccaaaatcttcaagtaacttgaagcgaaaatcc
agggttgtgagtgaaactaatttggctgcagacaaggaaaaccagccaaatgaaactgaa
agccaaaatattgataatgtgaagaaacattcaactggaaagattgtgtctaaatctaca
caagtgaagagcaagagaggtggggttaattctgaaggcaaaattgatgcatcaaaagtg
ggaaagatgtcaacaagcaagcaatttgaaccccagtggtttatattgagtggtcatcat
ctccagcgaaaggaatttcagcaggtcattaagaatctgagaggcagaatttgtagagat
tctcaccactggtgttatcaagctactcatttgattgtcccagatcctctccgcagaaca
gagaaattttttgcagcagcagcagctggaaggtggatacttaagacggattacctgact
gctagtagtcaagctgggaagttcctgaatgaagaaccctttgaatggtacaagactggc
ctcagcgaggatggtgctattaacttagaatctccacgaaaatggcgcttattaaggcag
aggacagggcatggtgcattttatggaatgaacatcatcatatatggagagtgcatcgcc
ccatccttggacacattgaagcgtgtagtgaaggccggcgatgggtcgatcctggctact
tcccctccctatcaccgttttctaaagtctcatgtggattttgccattgtcagtccaggc
atgcctcgagttgatgcatggatccaagaattcctagcccacaacgtcccatgcgttctt
gctgattacttggtggaatttgtctgcaaacctggcttttctctcgaccgccatgtcctc
tacaacacttatgctgctgccgaaaaatcacatgcaaaccatttacagaggctggaggtc
attgaggtgccaacacaggaagatgacattgtctgctcagtctgcaaactaaatgacaga
gcagaagtaatgctcatctgtggggatgatgcgggcaaagtaggctgtggagttgcaatg
cacattgactgctgtgatcctccccttgattctgttccagaagatgactggttttgttca
aaatgctgcagttctgttagcatgaaaggcgcaaaaaacagctctgttttgaaacgcaaa
tcatctcttcatgtaaaatga
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