Nymphaea colorata (blue-petal water lily): 116254042
Help
Entry
116254042 CDS
T07418
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116254042
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncol01009
]
116254042
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116254042
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116254042
03041 Spliceosome [BR:
ncol03041
]
116254042
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116254042
Protein phosphatases and associated proteins [BR:
ncol01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
116254042
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116254042
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116254042
Spliceosome [BR:
ncol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116254042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
116254042
NCBI-ProteinID:
XP_031484936
LinkDB
All DBs
Position
5:2238195..2244957
Genome browser
AA seq
316 aa
AA seq
DB search
MAMQGTDIDPGELDEIIARLLEARSSSRAGRQARLTESQIRQLCVASREIFLRQPNLLEL
EAPIKICGDIHGQYSDLLRLFECGGYPPQANYLFLGDYVDRGKQSLETICLLLAYKIKYP
ENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKVFTDCFNCLPVAALIDDKILCMHGG
LSPDLTSLDQVKSLSRPTDVPDAGLLCDLLWSDPGKDVQGWGMNDRGVSYTFGPDKVSEF
LSKHDLELVCRAHQVVEDGYEFFADRQLVTLFSAPNYCGEFDNAGALMNVDETLMCSFQI
LKPYEKKQNFFMTTRI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggctatgcagggcacggatattgaccctggtgagttggacgagataatcgcccgtcta
ctcgaggcacgatcgtcgtcgagggctggaaggcaggcccgccttacagagtctcagatt
cggcagctttgtgtcgcttcccgggagatctttctcaggcagcctaatctcctggagctc
gaagccccgattaagatatgcggtgacattcatgggcaatattctgatcttttgaggctt
tttgaatgtggagggtatcctcctcaagctaactatctatttttgggagactatgttgac
agaggcaagcaaagtcttgagacaatatgccttcttcttgcctacaaaattaagtacccg
gagaacttctttcttttgagggggaaccatgagtgtgcttcaattaaccgtatctatggc
ttttatgatgaatgtaaaaggagattcagtgttcgtctctggaaagttttcacagactgt
tttaattgcctaccagtggctgcgcttattgatgacaagatattgtgcatgcatggtggc
ctttctcctgatctgacaagcttagatcaggtaaaaagtttaagtcgcccaacagatgta
ccagatgctggtttgctttgcgatctgctttggtctgaccctggtaaagatgtacaaggg
tgggggatgaatgataggggagtttcttacacctttggtccagataaggtttccgaattt
ttgtcaaagcatgatctggagcttgtctgccgtgctcatcaggttgtagaggacggatat
gagttttttgcagacaggcagcttgtaacactcttctcagcacctaactattgtggtgaa
tttgacaatgctggtgcattgatgaatgttgatgaaactcttatgtgctcttttcaaata
cttaagccttatgaaaagaaacaaaatttcttcatgacaaccaggatatga
DBGET
integrated database retrieval system
