Nymphaea colorata (blue-petal water lily): 116254139
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Entry
116254139 CDS
T07418
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
116254139
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Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_3
PAS_8
Motif
Other DBs
NCBI-GeneID:
116254139
NCBI-ProteinID:
XP_031485141
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Position
5:24079600..24089791
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AA seq
1134 aa
AA seq
DB search
MASGSKGSHPDQQANKAIAQYNLDARLHAVFEQSGESGRSFDYSQSVKSTVESVPEQQIV
AYLSKIQRGGKVQPFGCTLAIDESSFRVVAFSENAVEMLDLTPQSVPTLGLTAGESLLGV
GTDVRMLFTPSSALLLEKAASAREITLLNPVWVHSRSSGKPFYAILHRIDVGIVIDLEPA
RSVDPALSIAGAVQSQKLAVRSISRLQSLPGGDIGLLCDTVAEIVRELTGYDRVMVYKFH
EDEHGEVVAESKRDDLEPYLGLHYPATDIPQASRFLFKQNRVRMIHDCNATPVRVIQDPA
LLQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIISSGNEDDLGHGGGVGAAGGGAS
TSGRQPVTKLWGLVVCHHSSPRSIPFPLRYACEFLMQAFGLQLNMELHLAAQLMEKKILR
TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYFQGSCWLLGVTPTEAQIKEIAEWL
LTCHGDSTGLSTDSLADAGFPGAASLGDAVCGMAAANIFSRDFLFWFRSHTAKEIKWGGA
KHDPEDKDDGQRMHPRSSFKAFLEVVKSKSLPWENAEMDAIHSLQLILRDSFRDAAAAVA
QEGGSKMMIDGQLGEPMLQGMDELSSVAREMVRLIETATAPIFAVDASGLINGWNAKVAE
LTGLTVEEAMGRSLVHDLVHSESAEVVDRLLSRALKGEEDKNVEIKLKTFGTQQQKKAIY
VIVNACSSKDYTDNIVGVCFVGQDITGQKVVMDKFVHIQGDYKAIVHSPNPLIPPIFACD
LNTCCSEWNTAMEVLTGWEKDDVIGKLLVGEVFGSCCRLKGPDALTKFMIILHGSIGGQD
ADKLPFAFFDRKGKYVQALLTANKRISMEGQIIGAFCFLQIASPELQHALEVQRKQEKKC
MARMKEMAYIYQEVKNPLSGIRFTNALLQNTNLTEDQRQFVETSAACERQMMNILRDVEL
ERVEDGSLELDVAEFLLGSVVNAVVSQVMILLREKNLQLIREIPEEIKLMTLYGDQLRFQ
QVLADFLLNIVRYTPSSEGWVELQIRPSLTTGGTELAHLEFRMACPGEGLPAELVQDMFH
KSRWVTREGLGLKMCRKILKLMGGEVQYIRESERCYFLIVIELPIRRGTKNVKL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggagcaaggggagccacccggaccagcaagcgaacaaggcgattgcgcag
tacaatctggacgcgaggctgcacgcagtgttcgagcagtcgggggagtccgggaggtcg
ttcgattactcgcagtcggtgaagtccacggtggagtccgtgccagagcagcagatcgtt
gcctatctgtccaagattcagcgagggggaaaggtgcagcccttcgggtgtacgcttgcc
atcgacgagtcgagcttccgggtcgtcgctttcagcgagaacgccgtagagatgctggac
ctaacgccgcagtcggtcccgaccttgggcctcaccgccggcgagtccctcctgggagtg
ggaaccgacgtccgcatgctcttcaccccctcgagcgcgctcctcctcgagaaggccgcg
agcgcccgggaaatcacgctcctcaaccccgtgtgggtgcacagccggagctccggcaag
cccttctacgccatcctccacaggatcgatgtcggaatcgtaatcgacctcgagcccgct
cgctccgtcgaccccgccctctcaattgccggcgccgtgcagagccagaagctcgctgtc
cgctctatttctcgccttcagtcccttcccggcggcgacatcggcctcctctgcgatact
gtcgctgagatcgtccgagaactcaccggctacgaccgcgtaatggtgtacaagtttcac
gaggacgagcacggtgaagttgtggccgagagcaagcgggacgatctcgagccctacttg
gggctgcactacccggccaccgacatcccccaggcgtcgcgcttcctcttcaagcaaaac
agggtgaggatgattcacgattgcaatgccacgcccgtccgggtgattcaggatcctgct
ctccttcagccgctgtgtctcgttggttccactctcagggctccacatggctgccacgct
caatacatggcaaacatgggttcgattgcttctctggccatggcggtcataatcagcagc
ggcaatgaggatgatctgggccacggtggtggtgtaggtgccgccggaggtggtgctagc
acttcaggcaggcagcccgtgacgaagctctggggtttggtggtgtgccaccactcatcc
ccaaggtcgattccgttccctctgcgctatgcctgcgagttcctaatgcaggcatttggt
cttcagctcaatatggagctccacttggccgctcagttgatggagaagaagattctcagg
acgcagacccttctctgcgacatgcttcttcgcgactctccgacgggaattgtcacgcag
tcgccgagcatcatggatttggttaagtgtgatggagcggctctctatttccagggcagt
tgctggttgcttggggtgactcccacagaggcgcagatcaaggagatcgccgagtggtta
cttacctgccatggcgattccactgggctcagcactgatagtctcgcggatgcgggtttc
ccaggtgccgcttcgcttggtgatgcggtctgcggtatggccgctgcgaacatcttctcg
agagacttcttgttttggttccggtcgcacacggcgaaggaaatcaagtggggaggtgcg
aagcacgatccggaggacaaggacgatgggcagaggatgcacccgcgatcttcgttcaag
gccttcttggaggtggttaagagcaagagcttgccgtgggaaaacgcagagatggacgcc
attcactcgcttcagttgatcctgcgagactcgttccgggacgctgctgctgctgtggcg
caggagggtggatcaaagatgatgattgatggacagctcggggagccgatgctacaggga
atggacgagcttagctccgttgctcgggagatggttaggttgatagagacggccacagct
ccaattttcgctgtagatgcatcgggccttatcaatggctggaacgccaaagtggcagag
ttgacaggtttgacggtggaggaagccatgggacggtccttggttcatgatcttgttcac
agcgaatcagctgaagttgtggataggcttctttctcgtgctttaaaaggtgaagaagac
aagaatgtggagatcaagcttaagacttttggcacacagcagcagaaaaaggccatatat
gtgatagtaaatgcctgttcaagtaaggattacactgataatatagttggtgtgtgcttc
gttggccaagacatcactggtcaaaaggttgtgatggataagtttgtccacatccagggt
gactataaagctattgtccacagtccaaatccattaattccaccaatctttgcttgtgac
ttgaacacttgctgttcagagtggaatactgcaatggaagtgctaactggttgggaaaaa
gatgatgtcattggaaaactactcgttggggaggtttttggcagttgctgtcggctaaag
ggcccagatgcattgacaaagtttatgatcatcctacatggttctattggtggtcaagac
gcagataagttaccgtttgcattttttgacaggaaagggaaatatgtccaggcacttttg
acagcaaacaagagaattagtatggaaggccagataattggagctttttgctttttacag
atcgcaagccctgagttgcagcatgcacttgaagtccagaggaagcaagaaaaaaaatgt
atggctagaatgaaagaaatggcatatatctaccaagaagtgaaaaacccattaagtgga
atacgatttaccaatgctctcttgcaaaacactaatttaactgaggatcagaggcagttt
gttgagacaagtgcagcatgtgagaggcagatgatgaacatcttaagggatgtagagtta
gaaagggtggaagatggctccctggaacttgatgttgctgaattcctgctaggcagtgtt
gtaaatgctgtcgttagtcaagtgatgattcttctgagagaaaaaaatctgcagttaatt
agagagatacctgaggagatcaagttaatgaccttatatggtgatcaactaaggtttcag
caagttctggccgacttcttactaaacatagtgcgatatactccaagttcagaaggttgg
gttgaacttcagatcaggccaagtttaacaactggtgggactgagttggcacatctagaa
ttcaggatggcgtgtccaggagagggtcttccagcagagcttgtccaagacatgtttcac
aaaagtagatgggttacaagggaagggcttgggttgaaaatgtgcaggaagattctcaag
ttgatgggtggagaagtacagtacatcagagagtctgaaaggtgttactttcttatagtc
atcgaacttcctataaggagaggtacaaagaacgtaaaattgtag
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