Nymphaea colorata (blue-petal water lily): 116254181
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Entry
116254181 CDS
T07418
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116254181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncol03041
]
116254181
Spliceosome [BR:
ncol03041
]
Common components
Common spliceosomal components
SR proteins
116254181
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
116254181
NCBI-ProteinID:
XP_031485227
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All DBs
Position
5:25067250..25075296
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AA seq
315 aa
AA seq
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MSRRSSCTIYVGNLPGHIREREVEDLFYKYGPTVDIDLKIPPRPPGYCFIEVMWHSWLAY
LGPQTQLPLQHMVSYLVGIALLQFENARDAEDAIRGRDGYNFDGHRLRVELAHGGRRRSS
PTDRYSSYSSSIGGRGGVSRRSDYRVLVTGLPSSASWQDLKDHMRCAGDVCFSQVFREGR
GTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYIRVREYDSPSRSHSGSYSRSRSRSPA
RRSLSYSRSRSRSESMSPRRKSPVRSPSRSRSRSVSSRSLSGSRHRSVSRSRSRSRSPFT
SARSYRKRSVGSRDD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgatcaagctgcacgatttatgttggtaatctacctggacatatacgcgaa
agggaggttgaggaccttttttataagtacgggcccactgttgatattgatctaaaaata
ccgcctaggcctccaggatactgtttcatcgaggtaatgtggcactcatggctagcttat
ttgggacctcaaacacagcttccgttacagcatatggtttcttatttagttggtattgct
ctgttgcagtttgaaaatgctcgtgatgctgaagatgctattcgagggcgtgatgggtac
aattttgatgggcataggctgagagtggaacttgctcatggtggtcgacgccgttcttca
ccaactgatcgctacagcagctatagcagtagcataggtggacgtgggggagtctcaagg
cgctctgattaccgggtcttggttacggggttaccttcatctgcttcttggcaagatctt
aaggatcatatgcgctgtgctggagatgtttgcttctctcaagtttttcgtgagggtcga
ggtacaacgggcattgttgattacacaaactatgatgacatgaaatatgctataaggaag
cttgatgattcagagttcaggaatgcattttcacgtgcttatataagggtacgggaatat
gattctccaagccgtagccatagcggatcctattctagaagcagaagcaggagtcctgca
agacgtagcctcagttacagccggagcaggagccggagtgagagcatgtctccaagaaga
aaatctccagtgcgatctccatctcgttcgcgatcaaggtctgtctcatcacgttctctt
tctggctcaaggcatcgttctgtgtcaagatcaagatccaggtcacgatctccattcacc
tctgcaagatcttacaggaagcgatctgttggttcaagagatgattaa
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