Nymphaea colorata (blue-petal water lily): 116254228
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Entry
116254228 CDS
T07418
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116254228
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116254228
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
90S particles
Helicases
116254228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
ATPase
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
116254228
NCBI-ProteinID:
XP_031485315
LinkDB
All DBs
Position
5:complement(26319011..26328330)
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AA seq
1358 aa
AA seq
DB search
MDGSVDLVEIAAEFIDRCSEKFDDCNALILPRKKKSKSEGTNKDKQNKEELKLSKSQKRK
LKQLQDLKEKKVRLAESFHILQKHKIQDDAYGFLYSSGNIGQAETMKEKLRRGMQLSRAG
LEVPENVPLLKEREHLHVSYPQSDLNMNIDVVMERHPEQVVQKTCSSLPSNIENAGLKDS
SLAEEQQMLNHVNKETGFSSSSSSNLDYASKALPLPEQQQMLIPMNKETGFSSSSSLPQS
LSGEELDACKSKENKGCSGGFNRQEDIEPQKSTAVGPFHGQKSFNVRVVRPADVEEKRID
LPIVMMEQEIMEAINAYSTVIICGETGCGKTTQVPQFLYEAGFGSKECLARGGLIGITQP
RRVAVLATAKRVAYELGLKLGKEVGFQVRHDKRMGECSSIKFMTDGILLREIQSDFLLKR
YSIIVLDEAHERSLNTDILIGILSRIIKLRQELYDDQQQKILSGVHVKPENMIFPLKLVL
MSATLKVEDFASNKKLFEVPPPVIEVPTRQFPVTIHFSRKTELVDYVGQAYKKVLQMHRK
LPPGGILVFLTGQREVEYFCKKLRKASLLLRKKGCEHRKANVDASSLAVDHTVHDDEAKD
ISEAFEISERKTNQQMCGLNIYQEEELDDAGSLSDSSELESENMDESEDDDDSSLEDVAN
QVKTNTLQDVIEDPESVASLRAAFQALTGNAEAVDSKEDTYLSCSPAEEGRAIHHGIKSA
VVGPMCVLPLYAMLPAAAQLRVFGDVPEGERLVVVATNVAETSLTIPGIKYVVDSGREKV
KNYNHANGMANYEIQWISKASAAQRAGRAGRTGPGYCYRLYSSAIFSNIFPEFSDPEILK
TPVEGVLLVMKFMGIDKVANFPFPTPPDSASLLEAERCLKVLEAIDNCGKLTPLGKAMAQ
YPISPRHSRMLLTVNSQLRKGGFRRANLVLSYAVAAAAALSSLNPFIFQFHPNSESKKDV
DQDSNSGTLENSSLRASAKTEVDGSEVPDKQAKLKHKKHKALVKEVREKFSNPCSDALTV
AKVLLHFELADNQSDFCTNYLLHFKTMDEMSKLRKQLLRLIFYPVLNSSQQEFSWMHGNI
DDVECAWRSFIGESLSLSEEELLGQAICSGWADRVARRIRKVTGVSDERKKVISARYQAC
MLSETVYLHRTSSVARLAPEFVIYNELVNTSRPYMHGITSIKSEWLVKHAKPLCSFSEPL
SDPKPYYEPVSDQVMCWVNTTFGPHLWQLPLHSCPCENQKLCISVFACALLEGKVLPCLK
STQKCLSAAPSSILIPEAAGQKRVGNLLDKLKNGTRFIDTRAMLRESWKKDPNLLYYEIA
DWFQEKYHNLFEQVWVQMHHEVMLEANQLFPKRKKRVK
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggatggatcagtggacttagtagaaatagctgccgaatttattgatagatgttctgaa
aaatttgatgattgcaatgcactcatcttgcccagaaagaaaaaatccaagtctgaaggc
acaaacaaggacaagcaaaataaagaggagttgaagttgagtaaatcacagaagaggaag
ttaaagcaattgcaggatttgaaggagaagaaggtgcgattagcagaaagttttcacatc
ttacaaaagcataaaatccaggatgatgcatatggctttttgtattcttcaggaaatatt
gggcaggcagaaactatgaaggagaagctcagaagagggatgcaactttctagggctggg
ttagaagtaccagagaatgttcctcttctcaaggagagagaacatttgcatgtctcgtat
ccacagtcggatttaaacatgaacattgatgttgttatggaaagacatccagaacaagtt
gtacaaaagacttgttcttcgctaccatcaaatatagagaatgctggcttaaaagattca
tctttggcagaagaacaacaaatgctgaaccacgtgaataaagaaactgggttctcaagt
tcttcttcctcaaatctagattatgctagtaaagctttgcctttgccagaacaacaacag
atgctaatccctatgaataaagaaactgggttctcaagttcttcttccttgcctcagagt
ttgtctggtgaagagcttgatgcctgcaagagtaaagaaaataaaggttgttcaggtggc
ttcaacaggcaggaagatattgagccgcagaagagtacagccgttggaccttttcatggt
caaaagtcattcaacgtgcgtgttgtgagacctgcagatgtagaagagaaaaggattgat
cttccaatagtcatgatggagcaggaaataatggaagctatcaatgcttactctactgtg
attatttgtggcgagactggatgtggcaaaactacacaagtgcctcaattcctatatgag
gctggttttggttctaaggaatgccttgcaaggggagggctcattggcatcactcagcca
cgccgggttgcagttcttgccacagctaagcgtgttgcatatgaattgggcctcaagttg
gggaaggaagttggttttcaagttagacatgacaagcgaatgggtgaatgtagctccatc
aagtttatgactgatgggattttgcttcgcgaaattcagagtgattttcttttaaagagg
tattccatcatcgttcttgatgaagctcatgaaaggagcttgaacacagatatactgatt
ggaatcttatccaggataataaaattgcgtcaggaactatatgatgatcagcagcagaag
attctttctggagtccacgttaaacctgagaacatgatatttcctttgaaacttgttctc
atgagtgctactctgaaggtggaagattttgcttcaaacaagaagctgttcgaggtcccg
ccaccagttatagaagtccctacaaggcaatttcctgtaacaattcacttttcaaggaag
acagagttggtagactatgtaggccaagcttataaaaaggtcttgcagatgcacaggaaa
ttgccgcctggtggcattcttgtatttctaacagggcagagggaggtggagtacttttgt
aagaagctaagaaaagcttccttgttgttaagaaaaaaaggctgtgagcatagaaaggcc
aatgtagatgctagttccttggcagtagatcataccgtgcatgatgatgaagccaaggat
atatctgaagcattcgagatttctgaaaggaaaacaaatcaacagatgtgcgggttgaac
atttatcaggaagaggagcttgatgacgcagggtctctgtctgattcctctgaactggaa
agtgagaacatggatgagagtgaggatgatgatgatagttctttggaggatgttgctaac
caagtgaagacaaatactttacaggatgttattgaagatcctgagagcgtagcatcactc
agagcagcttttcaggcattgactggtaatgcagaagctgtcgattccaaggaagatact
tatttgtcttgctctccagctgaagagggtcgtgctatccatcatggaataaagtctgca
gttgtgggtcctatgtgtgtcctacccctttatgccatgttacctgcagctgcacagctc
cgtgtatttggagacgtacctgagggtgagcggcttgtggtggttgctactaatgttgcc
gagacctcattaaccattcctggaataaaatatgtagttgattccggaagagaaaaagtg
aaaaactataaccatgcgaatggcatggcaaattatgaaattcaatggataagcaaagca
tcagctgctcagcgtgcaggacgagctggaagaactggacctggctactgctatcgtctt
tattcttctgccattttcagtaacatatttcctgagttttcagatcctgaaatactaaaa
acacctgttgaaggtgtattactagtcatgaagttcatgggtattgacaaggtggctaat
ttcccatttcccaccccgcctgacagtgcttcactgttagaagctgagcgctgcttgaag
gttcttgaagctattgataattgtggtaagctcacaccccttggaaaggccatggctcaa
tatcctataagtcctcgccattctcgtatgctgttgactgtgaatagtcagttaaggaag
ggcggctttagaagagcaaatttagttttgagttatgctgttgctgccgctgcagctttg
agctcgctcaatcctttcattttccaatttcatccaaacagtgagagtaaaaaggatgta
gatcaagatagcaatagtgggaccttggagaatagttctcttagggcctctgcaaagaca
gaggtagatggcagtgaagttccagataaacaggccaaactgaagcataaaaaacataag
gctcttgtgaaggaagtgcgtgagaaattcagtaacccctgcagtgatgctttgacggtg
gctaaggtgctgctgcatttcgaacttgctgataaccaatcagatttctgcacaaattat
cttttgcacttcaaaacaatggatgagatgtctaaattgcgaaagcaacttcttaggctg
atcttttatccggtcctgaacagttctcagcaggaattttcatggatgcacgggaacatt
gatgatgtggaatgtgcctggagatctttcattggtgagtctctttcattgagtgaagaa
gagctattggggcaagctatatgttcaggttgggcagatagagtggctcgacgcattaga
aaagttactggtgtatctgatgaaaggaaaaaggtaatttctgcgagatatcaagcttgc
atgctgagtgaaaccgtgtaccttcaccgcacatcatctgttgctaggttggctcctgaa
tttgtcatatataatgaacttgttaacacttctcgaccatatatgcatgggatcacaagc
ataaaatctgagtggcttgttaagcatgcaaagcccttgtgcagtttctcagagccactt
tcagaccctaagccttattatgaacctgtgagcgaccaagtgatgtgctgggtgaacaca
acttttggtccgcacctttggcagcttccactacatagttgtccatgcgaaaatcaaaag
ctttgtatttctgtgtttgcttgtgctttgcttgaaggaaaagtgctcccgtgcttaaaa
tcaacacaaaagtgcttgtctgctgctccatccagcattttgattccagaagctgcaggg
cagaaaagggtagggaatcttctcgataagctaaaaaatggtacaaggttcatcgatacg
cgtgctatgcttagagaaagctggaaaaaagatcccaatttgctgtattatgagatagcc
gattggttccaggagaagtaccacaatctgtttgaacaagtttgggtacagatgcatcat
gaagttatgctagaagccaatcagctcttcccaaaaagaaaaaagagagtgaagtaa
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integrated database retrieval system
