Nymphaea colorata (blue-petal water lily): 116254236
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Entry
116254236 CDS
T07418
Name
(RefSeq) probable small nuclear ribonucleoprotein F isoform X1
KO
K11098
small nuclear ribonucleoprotein F
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116254236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116254236
03041 Spliceosome [BR:
ncol03041
]
116254236
03032 DNA replication proteins [BR:
ncol03032
]
116254236
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116254236
Spliceosome [BR:
ncol03041
]
Complex A
U1 snRNP components
Sm proteins
116254236
U2 snRNP components
116254236
Complex B
U1 snRNP components
116254236
U4/U6.U5 tri-snRNP components
116254236
Complex C
U2 snRNP components
116254236
DNA replication proteins [BR:
ncol03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116254236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
116254236
NCBI-ProteinID:
XP_031485327
LinkDB
All DBs
Position
5:3364522..3369548
Genome browser
AA seq
91 aa
AA seq
DB search
MQAVPVNPKPFLNNLTGKPVIVKLKWGMEYQGYLASVDSYMNLQLANAEEIIDGQNAGQL
GEILIRCNNVLYIRGVPEDEEMENAGGGPGG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgtcccagttaatccgaagccctttttgaacaaccttacaggaaagcctgtt
atagtgaagctgaagtgggggatggaatatcaaggttatcttgcttcagtagactcttac
atgaatttacagctagctaatgctgaggagataattgatgggcagaatgcaggacaactt
ggtgagattctaatcaggtgcaataacgtcctctatattcgtggcgtacctgaagatgaa
gagatggaaaatgctgggggtggtccgggtggctga
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integrated database retrieval system
