Nymphaea colorata (blue-petal water lily): 116254237
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Entry
116254237 CDS
T07418
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncol03016
]
116254237
Transfer RNA biogenesis [BR:
ncol03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
116254237
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
ANAPC4_WD40
TPR_GEMI5
Beta-prop_EML_2
Sde2_N_Ubi_yeast
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
116254237
NCBI-ProteinID:
XP_031485329
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All DBs
Position
5:complement(342252..353464)
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AA seq
1376 aa
AA seq
DB search
MPLCLRAAVPSLKVSLPLSRVPALRRPPFPVMKNLKLYAEYGAKIDLPYDGERLSLSAAD
AELNRLFFATSANAIYVLHLSSSQENSSTEFWVSDVPLSPTLEPDDYIMALDYLMEKEAL
IIGTLGGFLLQHSLDGDLTEVVGRVEGGVKSIAASPDGSLLAVATGLGQLIVMNQDWDVL
YEVMLEPPASGSEMNVHWEGSCVSKVQVSWRGDGKFFATLVSAGGSSSLSRIRIWDRETG
ASLSSSEYKVFMGGSLDWMPSGAKLVAAYDRATEQKCPLIVGFERNGLERGSFSIDDAVE
ATVDMLKWNCNSELLASLSRCKEYDSLKVWHFSNNHWYLKHESRHSKTDYVSFCWDPVKP
LNLIAWMQDGKFRSKNFAWVTAVTEKSIALVIDNCSILVSPLSMSLIPPPFSLFSLKFQS
AVQDIAVLSQHSKNRLAVALSDGCLSIVELPLMDSWENLEGKEFIIESCHSDYSFVGIGH
LTWLNHQVVIAIGLCESGVDDACHEKFSRNNGFSCEDKMRQACSYLFMEVQFICSEDSVA
DTVTSSGWHAKVSKRICLQKPVLGVVKNPTEDGSAFVQFVGGSVVEYTLKSGLRMPSLDV
GQKNPNIFTGFTSSCPWMKAAQVRDDGILKPLIFGMDEHGRLHARNIIVCNNCSSFSFYS
SSTGLSEQVFTHIILTTKQDFLHIISLGDILHKNHEVGCEKYIVNDGKISNQESRDALKV
WERGAKLIGVIHGDEAAVILQTTRGNLECIYPRKLVLTSIANALIEGRFKDSMLMVRRNR
IDYNIVVDYCGWQAFLQVAPEFVKQIKNLSHITDFVCSIKNENVMETMYKNFVTLPLIGK
EGTGMHVVRVEHSDMKNKVSAVLSSVRRALEEYVPESPARELCILTTLARNEPPALGEAL
KRIKRIRELELSGTVNKNDPADSKSSPSAEEALKHLLWLSDSEAVYETSLGLYDLNLAAI
VALNSQKDPKEFLPFLQKLEQMPPIVMRYTVDLKLRRFESALLNMASAGEDCFEDSLILM
KKNPQLFSLGLQLYSDCSRRSQVFEAWGDHLFGEESFTDAASAYLCCSSLEKALKAYRSC
NNWKGVLTVAGLLNLSKEKLLQLAHELCEELQALGKPAEAAKIALEYCHDVHSGIMYFIS
AREWEEALRVGFLHGREALISEVKNAAAECASVLISEYEEGVEKVGKYLARYLAVRQRRL
ALAAKLQSDERSVNDDDDDASETSSTFSGMSAYTLGKGKGSAASISSSSTSRTKERRRQR
NRGRIRAGSPGEEIALVDHLKGMALTSVAAHELKTLLGALLMLGKEETARKLQRMVSSFQ
LSQRAAVKLAEDCLSNETMDTNALSLDNYIDKLKKELPDYQDPSWQSIILHPPLQR
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtgccttcgagccgccgttccctctctcaaagtctcactccctctctctagg
gttcccgctctgcggcgccctccatttccggtgatgaagaacctgaaactgtacgctgag
tacggtgcgaagatcgacctgccatacgatggggaacgcctttctctctcggctgccgat
gcggaactaaaccgactcttttttgctacttcagcaaacgccatctacgtccttcatctc
tcttcctctcaggaaaattcatcaactgaattttgggtatctgatgtaccgttaagtcca
acattggagccagatgactacattatggctttggattatctcatggagaaggaagcatta
ataataggaactttgggtggttttctgttacaacactccctggatggtgatttaactgaa
gtggttgggagggtggagggaggtgtcaagagcattgctgctagtccagatggcagtctt
cttgccgtggcaacaggtctagggcaattgatagtcatgaaccaagattgggatgttctg
tatgaagtcatgcttgaacctcctgcatctggatccgaaatgaatgtgcattgggaaggt
tcatgtgtatctaaagttcaagtttcttggcggggtgatggcaagttttttgctacatta
gtttctgcagggggttcctcttccttaagccgaatcagaatttgggaccgtgaaactggt
gcctctctttcttcttctgagtacaaggtctttatgggaggatcactagattggatgcct
agtggtgcaaaattggtggctgcatatgatagggcaactgagcagaagtgtcctttgatt
gttggttttgagaggaatgggctggagagaggctctttcagtattgatgatgcagtcgaa
gcaaccgttgatatgctgaagtggaattgcaactcagagcttcttgcaagtttatctaga
tgcaaagagtacgacagtttaaaagtttggcatttcagtaataaccactggtacttaaag
catgaaagtagacattcaaagacagattatgtaagcttttgttgggacccggtgaagcct
ttaaacttgattgcatggatgcaagatggtaaattcaggagtaaaaattttgcatgggta
acagctgtgacagagaagtcaatagcattggtgattgacaattgtagcatacttgtgtct
cccctttctatgtcacttattcctcctccgttttctctttttagtcttaagttccaaagt
gctgttcaggacattgctgttctgtctcaacactcgaagaaccgccttgcagtggctcta
tctgatggctgtttaagtatcgtggagctcccgttgatggatagctgggaaaatttggaa
ggtaaagagtttattattgaatcttgtcattctgattacagttttgttggcattggacat
cttacatggttaaaccaccaggttgttattgcaattggactttgtgaatccggtgtggat
gatgcttgtcatgaaaaattttccagaaataatggattctcttgtgaagataaaatgaga
caagcatgtagttatcttttcatggaagttcaatttatttgctcagaggattctgtggca
gatacagtgacctcttcaggttggcatgcaaaggtttccaaaagaatatgcttgcaaaag
ccggtccttggtgtagttaaaaatcctactgaagatggatctgcttttgtacagtttgtt
ggaggatctgtagtagaatacactttgaagtcaggcttgagaatgccatctttagatgta
ggacagaagaaccctaatatctttactggttttacttcatcatgcccttggatgaaggct
gctcaggtcagggatgatggcatactcaaacctttgatttttgggatggatgaacatggt
agactgcatgcacgtaatataatagtctgtaacaattgcagtagtttttctttttattct
agtagcactggattatcagagcaagtttttacgcacattattcttaccactaagcaggat
tttctgcacatcataagtcttggggacatactacataaaaaccatgaagttggatgtgaa
aaatatattgtgaatgacggcaaaatcagtaaccaagaaagtagagatgccttaaaggtt
tgggaaagaggtgcaaaattgatcggtgtgattcatggagatgaagcagctgtaattcta
cagacaactcgtggtaatctagaatgtatatatccacgaaaattggttcttacatccatt
gccaatgcattgattgaaggccgtttcaaagattctatgcttatggtcagacggaacagg
atagactacaatattgttgttgactactgtggttggcaagcttttcttcaggttgctcct
gaatttgttaagcaaataaaaaatcttagccacataacagattttgtgtgttccataaaa
aacgaaaatgtcatggagacaatgtacaagaactttgtcactctgcctctgatcgggaag
gaaggtactggcatgcatgtggtgagagttgagcattctgatatgaaaaacaaggtttct
gctgtcctgtcctctgtccgaagggcccttgaagaatatgttcctgagagccctgcaaga
gagctctgtattttaactacactagcccgcaatgagcctcctgctctaggggaggcatta
aaaaggataaaacggatcagagaattggagctttcaggaacagtcaacaagaatgatcct
gctgatagcaaatcttctccttctgcagaagaagcgcttaagcatcttttatggttatca
gattctgaggctgtatatgaaacttcattaggattgtatgatcttaatcttgcagccatt
gttgccttgaactctcagaaggacccaaaggagtttcttccctttctacaaaaactagag
caaatgccacctattgtcatgcggtatacagtagatcttaagctgcggaggtttgaaagt
gctctcctgaatatggcatctgcaggtgaagactgttttgaggattccttgatccttatg
aagaagaaccctcaacttttctctttgggacttcaattatatagtgattgttctaggagg
agccaagtatttgaagcctggggtgatcatctttttggagaagagtcttttactgatgca
gcatctgcatacctgtgctgttcttctttggagaaagctttgaaagcatatcgttcatgt
aacaattggaagggtgtgcttacagttgctggacttctgaaccttagcaaagaaaagctg
ctgcaattggcacatgagctctgtgaagaactccaagcacttggtaaacctgcagaggca
gctaaaattgctctagagtattgccatgatgttcatagcgggatcatgtatttcataagt
gctcgtgagtgggaagaggctctaagggtggggtttctgcatggaagagaggctttgata
tctgaggtgaagaatgcagctgcagaatgtgcaagtgtattaatatctgaatatgaagaa
ggggttgagaaagtagggaagtacttggctcgctatttagctgttcggcagagaagattg
gctcttgctgccaaactacaatctgatgaaagatcagtcaacgatgatgatgatgatgct
tcagaaaccagcagtaccttcagtgggatgagtgcttacactctggggaaaggaaaaggc
tcagctgcatctatcagctctagctctactagcaggacaaaggagcgccgacgtcagaga
aaccgaggcaggattcgtgctggcagcccaggagaagaaattgctctagttgaccatttg
aagggcatggctctaacaagtgtagctgcacatgagctgaagactcttctgggtgctctt
ctgatgctgggaaaggaagaaactgccagaaagctacagcgaatggtgagcagcttccag
ttgtcacaaagggctgctgtaaaattggccgaagattgtttatccaatgaaaccatggat
acaaatgccttgtcattggataattacattgataagctaaagaaggagcttcctgattac
caagatccctcatggcagtcgataatactgcatcctcctctgcagagatga
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