Nymphaea colorata (blue-petal water lily): 116254271
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Entry
116254271 CDS
T07418
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116254271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116254271
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116254271
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
HECT type E3
116254271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
HEAT
Adaptin_N
TPR_TNPO3_IPO13_4th
IL4
DUF7430
Motif
Other DBs
NCBI-GeneID:
116254271
NCBI-ProteinID:
XP_031485400
LinkDB
All DBs
Position
5:7451213..7467740
Genome browser
AA seq
1566 aa
AA seq
DB search
MDKRNHQREEMVDVLPADKRVCSTSEYKSDSLNLPAPADIVSKNSGPEHLELDMEASSSL
SERDREDDSSQGEMVENSLSYNQPDLTNDDAPSHSDDLSYSATSRNRGYLDAREHYDPNS
SSLFGPNKGHLKKICSSLKLVSSLDIQLANLTELCDVLSLCTEDSISFSCTESLVPTLIG
LAKHDNPEIMLLAIRAFTHICNIMPLSSLFISRHDVVPTLCARLMVIEYIDVAEQCLQAL
EKISHDHAVVCLRNGAIMAALMYIDFFPTTVQRVALSAVATICKRLPSDSFSSIKDAVPI
LSNLLHNEDQKIVESAVTCLVNIIRCFSSSNDMLDELCKPGLLQQATDAISINSQMVLNR
QAFTGLIGMLSMVACGSAVAAEALLDMNIISTLRDILSTCRFSCGAAYSLAGDVYSDQIC
AVLNLLNVLLPPLEGETTQMLCCKENKFKDQPGLLQYGMDILPVLIHVGGSGANLSLCYG
SLLVMNKLVHYSTSDMLQDMLTNKNMCSFLTGVIALKDHHVLIPVLRLIDNLMQKLPKVY
VQLFVKEGVVAAVDMLLLPEACLNEKHKVNKPNSSIRRAISVLKTVSNDDRKCLCASFSA
HHTPSSRGICKLDKEMVCTLAKHIKETYFPLEVQISGAGLTEKLQRMKALCKNLSEQSCL
DDSVTDHKLYLNDILERLMVELKEGDPLSTFEFIESGIIKSLTNYLGCGKDLKEKIVDHN
LLDYFGKVQRRFIFFAQLAFASTSGQWRDLSSAVIVDKLLSALSTLENLPVVHVDRPKSR
GSYADIPGRYTSYPCLKVCFMKDVEDKYFHEYSSNVVTVELLASMDAVEDYLWPLISKNG
RHSESTNQYMPDKEKVHTPATEDCSNVSSDLLGPQSCVSRTPSVSSETTHTMEYVSMSDN
GVALRQTVEAGTASEDASRSKECAANIRDSTEFDKEYAPSKLDFFFQGKLLDRSVTLYQA
ILQQLMQENALSSTRLWNEVFHISFKRSLQSETRNCGQEFIHVLANWIQKGVPSIRKSKM
EFPAEFGMPDPICDVLFLLQTIERLNRSSFHLMSYEREESFPEGNLGTLNAFEVSTPAIP
QSEFVSSKLTEKLEQQMHDPFCVDSRCLPSWCNQLVSEFPFLFSFEARRKYFQLCLSGFL
RSKCRSLSQHGSTNNANISNERSHASTVPKKKFQVQRDCILDSALKMMDGHARDEAILEV
EFAGEVGTGLGPTLEFYILVSREFQKTSINMWRGTNYNWSPTNREGFEVEDFISPPHGLF
PRPWSLDALHSTDFSEVEKKFLLLGQVVARALQDGRMLDLPFSKAFLRLVLGQDLDLYDI
KSFDPELGKAMEELQAIVGRKKFLDTVGSGHEVTADLQLGGSKIVDLCLDFTLPGYPDYV
LKGGAEHELVSLDCLGEYVSLVVDATVKSGIGRQVEAFKSGFNEVFPIHHLQIFREDELD
RMLCGEQEAWVSEAFLDHVKFDHGYTSSSLPVIHFLEIVREFKHEERSAFLQFVTGAPRL
PPGGLAALNPKLTIVRKNSGSNADWDLPSVMTCANYLKLPPYSTKERARERLLYAITEGQ
GSFHLS
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacggaatcatcagcgtgaagagatggttgatgtgcttccagcagataaaaga
gtctgttctacttcagagtacaagtctgattctttaaatttacctgctccagcagacatt
gtgtccaaaaattctggacctgaacatttagagctggatatggaagcttccagttctctt
tctgagcgggacagagaggacgattcatctcagggtgaaatggttgagaattctttatca
tataaccagccagacctaacaaatgatgatgctcctagccactctgatgatctcagttac
agtgcaacgtccagaaatagaggttacctggatgcgcgcgagcattatgatcctaatagc
tcttctcttttcggtccaaataaaggtcatttgaagaagatttgttccagtttgaagctt
gtctcttcactggatattcagcttgcaaacctaactgagctatgtgatgttctgtcatta
tgcacagaagactcaattagcttttcttgcactgagtcattggttcctactcttattggc
ttggcaaagcatgacaacccagaaataatgcttttagcaatcagagcatttacccacata
tgcaatattatgccattatcttctctgtttatctctcgtcatgatgttgttcccacactc
tgtgcacgcttaatggtgattgaatacatcgatgttgcagagcagtgtttgcaagcactt
gagaagatatcccatgatcacgcagttgtttgccttcgtaatggtgcaatcatggctgcg
ctcatgtatattgacttttttcctaccacagttcagagagttgcactttctgctgttgca
accatatgcaaaaggttgccatctgacagcttttcgagcatcaaagatgctgttcctata
ttgtctaacctgcttcataatgaggatcaaaagattgtagagagtgctgttacctgcttg
gtgaatatcatcagatgttttagtagctcaaatgatatgttagatgaactgtgcaagcct
ggtttactccaacaagcaactgatgctatatccatcaacagtcaaatggtgctcaaccgg
caggctttcactggccttattggaatgctttccatggttgcctgtggctcagctgttgca
gcagaggctcttctggacatgaacattatctctacccttagagatattttaagcacttgt
agattctcttgtggtgcagcatattctcttgctggtgatgtatactctgatcagatatgt
gctgttttaaatttgttaaatgtgttgcttcctccactggaaggtgaaactactcagatg
ctatgttgcaaggaaaataagttcaaggatcaacctggacttcttcagtatggaatggat
attcttcctgtcctgatccatgtaggtggttctggtgcaaatttatcactttgctatgga
tccctccttgtcatgaacaaattggtgcattatagcacatctgatatgcttcaggacatg
cttaccaacaagaatatgtgtagcttcttgacaggtgttattgctctgaaggatcatcat
gtgctgattcctgttctacggttaattgataacctcatgcaaaagcttcctaaagtttat
gtgcaattgtttgtgaaggagggtgttgtagctgctgttgacatgcttcttttgccagaa
gcctgcctgaacgagaagcataaggttaacaagcctaatagttctattagaagagcaatc
tcagttctgaaaactgtctcaaatgatgataggaagtgtttgtgtgcaagtttcagtgcc
catcacactccatcatcaagagggatttgtaaacttgataaggaaatggtttgcacccta
gctaaacacataaaggagacatactttccgttggaagtgcagatttctggggctggacta
actgaaaaacttcaaaggatgaaagcactttgtaaaaatttatctgaacagtcttgctta
gatgacagtgtcactgatcacaagctctatttgaatgatatcttggaaaggctaatggtt
gaactgaaagaaggggatcctctgtccaccttcgaatttattgaaagtggaataataaag
tctttaactaattatttgggctgtgggaaggatctgaaagagaaaatagttgatcataat
ttgttggattattttggcaaagttcaaaggaggtttattttttttgctcagcttgctttt
gcctctactagtggacagtggagagatctgtcttcagcagttattgtggataaactgttg
agtgcattgtccacacttgagaatctccctgttgttcatgttgatcgtccaaagtcgaga
ggttcttatgctgatattccagggcgatatacatcctacccttgtttgaaagtatgcttt
atgaaagacgttgaggataagtatttccatgaatattcatccaatgttgtaacagttgaa
ctgcttgccagcatggatgcagttgaggattacttatggcctctaattagcaaaaatggt
cgtcattcagaatctactaatcagtatatgccagacaaagagaaagttcacactccagca
acagaagattgctcaaatgtttcttcggatttattagggccccagagttgtgtaagtaga
acgccatcagtttcatcagagacaactcacacaatggaatatgtatctatgtctgataat
ggtgttgctcttcgacaaacagtggaagcaggaactgcttctgaagatgcctctcgtagt
aaagaatgtgcagcaaatataagagattctactgagtttgacaaggaatatgcaccttca
aaattggatttcttctttcaaggaaagcttcttgatcgctctgtaactctgtatcaagca
attctccagcaattgatgcaagagaatgctttgagcagcacaaggttgtggaatgaagta
tttcatatttctttcaaaaggtccttacaatcagaaacaaggaattgtggacaagaattc
attcatgtattggcaaattggatccagaagggtgtcccttcaatcagaaagtcgaaaatg
gaatttcctgctgagtttgggatgcctgaccctatatgtgatgtactgttcttgcttcaa
acaatagaacgtctcaatagatcttcattccacttgatgtcatatgaaagggaagagtcc
ttccctgaagggaatttaggcactttgaatgctttcgaagttagtactcctgctattcca
caaagtgagtttgtcagcagcaagttaacagaaaaactggaacagcagatgcatgatcct
ttttgtgtagacagcaggtgtctgccctcttggtgtaatcagctggtgtctgagttcccg
ttcttgttttcttttgaagcaagaaggaagtactttcagttgtgtttgtcaggtttctta
agaagcaagtgcagaagtttatcacagcatgggagtactaataatgctaatatctcaaat
gagaggtcacatgctagtactgttccaaagaaaaagttccaagttcaacgtgattgtata
ttagattctgctttgaagatgatggatggacatgctcgtgatgaggctatccttgaagta
gaatttgctggtgaagttggcacaggtcttggtccaacgttggagttctatatacttgtc
agtcgtgaatttcagaaaaccagtataaatatgtggagaggaaccaattacaattggtca
cctactaatagagaaggctttgaagttgaggattttatatcccctccccatgggttattt
cctcgtccttggtcattagatgccttacacagtacagacttttctgaagtggaaaaaaag
tttctccttctgggccaggtagtagcaagggcacttcaagatgggcggatgctggatctt
cccttttcaaaagcattcctcagacttgtccttggccaggatcttgatctgtatgacata
aagtcatttgatcctgaactgggaaaagctatggaagagctccaggctattgttggtcgg
aagaaatttttagacactgttggaagcgggcatgaagtgacagctgatttgcagctaggg
ggttctaaaattgtggatctatgtcttgattttactttgccaggatatcctgattatgtc
cttaaaggaggagcagagcatgagttggtaagtcttgactgcttgggagaatatgtttca
ctggttgttgatgcaacggtgaagagtgggattgggagacaggtggaagcttttaaatca
ggatttaacgaggttttcccaatacatcatcttcagattttcagagaggatgagcttgat
cgcatgctttgtggggaacaagaggcttgggtgtctgaagccttcctggatcacgtcaaa
tttgaccatggctacacatccagcagtcttcctgtcatccatttccttgagattgtcaga
gagtttaagcatgaggagcgaagtgctttcctgcaatttgtgactggtgcacctcgactc
cctcctggtggtctggcagcattaaacccaaaactaacgattgtccgtaagaattctgga
agcaatgctgattgggatttgcctagtgtgatgacatgtgcaaactatctgaaacttcct
ccatactctacaaaggagagagcaagggagagactgctgtacgccataactgaaggacag
ggttcgtttcatctttcatag
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integrated database retrieval system
