Nymphaea colorata (blue-petal water lily): 116254344
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Entry
116254344 CDS
T07418
Name
(RefSeq) plant-specific TFIIB-related protein PTF2 isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116254344
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116254344
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
zf-UBP
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
116254344
NCBI-ProteinID:
XP_031485573
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Position
5:complement(306418..324872)
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AA seq
602 aa
AA seq
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MEDHRRCNKCGARSVIFDSPNWVCCQCGTVQDSDHFVSHLDVYTENLGRSVAIGQSNPTV
STNFGGRRIFIRGDYNYKERKEFEARRTIDDIMSSLEFSPSRADDVKYMVEKITEGEWGG
GNWFPVLVGACAYVVARQNHLPLTITQVAAVITCDVHELGRMYTRVREFLKLDLPETNIF
MILERAIRNSPSFLDIPKEKISVMIMQGRFLLQCSIKWFLTTGRHPLPMITAIVAFVAEI
NGQVKVGVDEISKELSACKSTSRQRLKELQGSLVKVAKKLPWGGDVTSKSLVHHAPFIIQ
FMQVKSKIKATAMPNVSLPEAQCQKVGTFSIGSRSSHSAKAALDELLDLPSGSSIHRCTK
ASNTESESDDIGIQEMSLAHATHLNSEKLKLSVECLKNAYARFQERDVSRTLLGDAEGVC
GAKRRKKDTVPAPPEKIHAGILNCHLNKRVSSHELLERDVGLDSFPPSFLTSMDVYMRRR
RKIEAAKLRINKIMDSKISSQRRSLTEQDNVSDDEEYTDVASCSTSKLYQQAGEKDIDWE
DCIIELLLLHLVSEEEIEKGYYRSLLGLYVFSSGHNISNEELGSYLRPKEEVALLSMLKD
WE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccatcggcgatgcaacaagtgtggggcccggtcggtgatattcgactcgccc
aattgggtctgctgccaatgcggcactgtccaggattctgatcacttcgtttctcatctt
gacgtctacacggagaatcttgggcgttcggtggcgattggacaatccaatcccactgtt
agcactaattttgggggccgccggatctttatccggggagattataactacaaggagcgt
aaggagtttgaggctagaaggacaattgacgatatcatgtcaagcttagaattttctcct
tcaagagctgatgatgtgaaatatatggttgaaaagataactgaaggtgaatggggtgga
ggaaactggttccctgtccttgttggtgcctgtgcttatgtggtagctcgacagaatcat
ctacctcttacaattacacaagttgctgctgttattacttgtgatgttcacgaacttggg
cggatgtacactcgggttagggagtttctcaagctggatttgccagagacaaatattttc
atgattttggagcgggcaattcgaaactctccaagcttcctggacattccaaaagagaaa
ataagtgtgatgattatgcaagggaggtttctgttgcaatgctccatcaagtggtttcta
actacagggcgacatcctcttccgatgattactgctatagtcgcttttgttgcagagatc
aacggacaggtgaaagttggagtagatgagatttcaaaggagctttctgcatgtaagagt
accagcaggcaaagacttaaagagctccaggggtctttagttaaggttgcaaaaaaattg
ccctggggaggagatgtgacaagcaaaagtttagtgcatcatgcaccattcattattcag
tttatgcaggtgaaatcaaagataaaggcaacagctatgccaaatgtgtcacttccagag
gcccaatgccagaaggtagggactttttcaatcggctccaggtccagtcactctgcaaaa
gctgctctggatgagctcttggacttgccttctggatcttccatccatagatgtactaaa
gcaagcaacaccgagtccgaatccgatgacataggtattcaggaaatgtcattagcacat
gcaacacatttgaattctgaaaagctcaagctttcagtagagtgtttgaagaatgcatat
gcaaggttccaagagagggatgtttctagaactttgttgggagatgcagaaggagtatgt
ggtgcaaaaaggcgaaagaaggatactgtgccagcacctcctgaaaagatacatgctggc
atcttgaattgtcatttaaataaaagagtttcatcccatgaacttcttgaaagagatgtt
ggactggattcctttcctccatcctttctgacaagcatggatgtttatatgaggaggaga
agaaagatagaagctgccaagctgcgaatcaacaaaattatggattctaagatatcatcg
caaaggaggagcttgactgagcaggataatgtttcagacgatgaagagtatacggatgtg
gcaagctgcagtacaagcaaactttatcagcaggctggagaaaaagatattgattgggaa
gattgtattattgaactccttctcttgcatctggtaagcgaggaagaaatagagaaggga
tactatcgatctctacttggtttgtacgtctttagttctggtcataacatttcaaatgaa
gaacttgggagttacctacgccccaaagaagaagttgctttattatcgatgctaaaggac
tgggagtga
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