Nymphaea colorata (blue-petal water lily): 116254417
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Entry
116254417 CDS
T07418
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116254417
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
90S particles
Other 90S particles
116254417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
Motif
Other DBs
NCBI-GeneID:
116254417
NCBI-ProteinID:
XP_031485662
LinkDB
All DBs
Position
1:9206520..9277070
Genome browser
AA seq
1926 aa
AA seq
DB search
MAAKKFTKRKASDPSRGTPDGASKPNIQIGTEDDEAPDFPRGGGGVLSRVEVEQARTEAE
AEFETEERTRENLGKRKRPRKTSFEDDDLGSLFGEGFAGKLPRLANKITIKNVLPGMKML
GVISEVNPKDLVVSLPGGLRGYVRAEEASDLLAENKLNEISSNKTARQRKNEASSGTLLS
VFIVGQLVPCIVLDVEHHDGKEKKRILLSLRLSLLQKGLTLDLVQEGMVINANVKSIEDH
GYILHLGSSSFSGFLPRSDGNEKGDNSIGKGQLLQVVVSNVDKVRKVVSFKPSLNYLCIN
LTKEYRGLSVDLLFPGMLVEAHLKSVLANGVLVSFLTYFTGTVDIFNLENLFLKSSWKDM
YHIGMRVRARILFIDPITRAVGLTMNPHLLQGHLPPSHVRAGDVYEDARIIRIDGRSGLL
LEVSSSPIHTPAYVKTSDATDEEGFKLETKFKEGNVVRVRVLDFRQMEGLAICAVKASAF
EESYFTHADVKPGMVVRGKVIKIEVDAAVIQFLGGLKALCPLQHMSEHSLAKPPKKFKVG
VDLVFRVLGGKSKRITVTHKRTLVKSKLSIVASYIDATEGMVTHGWIAKIEKHGCLVRFY
NGVQGFTHISELGINQSEIDSCYHVGQVVKCRILSANPASRRINLSFKMSSERRIMVDIP
ELGSIVSGVVGQLSPSAIIVHVNGKSDLKGTIAMEHLADHLSHGSRLKALIKPGYEFKKL
LVLDKDSKRMLLSAKRSLISSADQIPSDISQVQSGSVIHGYICNVIENGCFVRYLGHMTG
FASKKNALDDHGGSVTECFCIGQSVRSHVLEVNAESRRVKVSLKQSSCYSSDASFMEEYF
HMEDEIAMLQQSEPEGSDMKWMDSFVVGSMVEAEVQGLKEFGVVVSFKKYPDLVGFITNY
QLDGNNVGVGSTVKALVIDISKVDNIVDLSLKHSLIEEYQRKAFGHSRSKKRPRGLGKDV
IFGDTVNAVVELIKDNYLVLSLPEHGHAIGYALSSDYNTQKFSRKKYVEGARVVATIGML
PSPPSGRLLLLLKSLSEQVKCSSSKKDRKRTLLSVGSIVGAEITDIRASEILTKFSLGLH
GRIYITEVCDHDDHQPFDLNPFSKFRIGQTLMAKIIAKASKPKDTAKSYTWELSVRPSVL
SGKVETSDENSREDFDFSNGQHVIGYVINVGDEWARLAISRLVKGDLFVLDTSTDPSELQ
EFQKRFRPGQPLSCYILSINKDKRRLRLGLTDVVRQLDDKRGGSDMNQDLFGRIREGDII
GGKITEVLPGVGGLVIQISPHVFGKVHFTEVTDSWVSNPIDGYSKGQFVRCRVLEVGRSA
NGAFYVDLSLRDSFINSQAINLGGGTVDLSSSKRFTKSDDLYPNMEVKGYVKVVTEKGCF
ITLSRKIDARILLSNLSDEYIEAPEKGFPVGKLVHGRVLSVEPLSKRVDVSLRTKLPRVT
PDINIIDMQSFKAGNIISGKIRRVEPYGLFITIDHTNTVGLCHVSEVPDEHRDSLEARYC
AGEKVMAKILKINVEQGRVSLGMKTSCLGGHHTITPKANGIGKKIADNAAANDVSNIFME
KNGSMTADEVAVDDNVTNDLLIPSQIKSRASVLPLEVTFDDEELGLGHQVVDFDDSGITK
TVAESCAAEKRRLKRKAKVERELQIKAAEDKLLNEDAAPTSVDDFEKLVRSSPNSSYLWI
KYMAFMLSLRDVPKARSVAERALATINMRVEGEKLNVWIAYLNLENEYGIPRKEAVEKIF
ERACQSCDSKKLHLALLGTYERTGQQELANELLNGMTKKFRTSCKVWLRYIETLLKQGKG
EAQAVVNRAILSLGQWKHIKFISQAAMLEFKHGLPDRGRSMFEKILRTYPKRIDLWNVYL
DHEIRLKDQELIRALFERATSLSLPPKKMKSLFKKYLCYEKSCGDEERVEYVKRKAMEYV
ESATGP
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaagaaatttacgaagaggaaggcgtctgacccttcccgtggcacccctgat
ggcgcttctaagccgaatatccagatcggcacggaagatgatgaagctcccgacttccct
cgaggaggcggtggggttctgagtcgggttgaggtggagcaagcacggacggaagcagag
gcagagtttgagacggaagagagaacgagggagaatttgggaaaaaggaaacgcccaaga
aagacttcattcgaagacgatgacctcggttctcttttcggagaaggcttcgcggggaaa
ctgccacggcttgcgaataagattactatcaagaacgtcttgcctggaatgaagatgctg
ggcgttatctcggaagtgaatcccaaagaccttgttgtgtctcttcctggtggattaagg
gggtacgtcagagccgaagaagcatccgacttgctggcagaaaacaagttgaatgaaatc
tcatccaataaaactgctcgtcagcggaaaaatgaagctagcagcggcacccttctcagt
gtatttattgtagggcaacttgttccttgtatcgttttggacgtagagcatcatgacgga
aaggagaagaaaagaattttgctatctttacgcctttccttactgcaaaaggggcttacg
ttggacttggtgcaagaaggaatggtgataaatgctaatgtcaagagcatcgaagatcat
ggatatattcttcatcttggatcatcatcattttctggatttctaccacgatcagatgga
aatgagaaaggagataatagcattggaaagggacaacttttgcaagttgtggtttcaaat
gttgataaagttcggaaagtcgtttcattcaaaccatctctaaactatttatgcataaat
ttaactaaggagtatagaggcctctcagtcgatctattatttcctggcatgttggttgag
gctcatttgaaatcagttctggcaaatggggttcttgtatcatttctaacgtattttaca
ggaactgttgatatttttaacttggaaaatctcttcctcaaatcttcctggaaagatatg
tatcacattggtatgagggtgagagctcggattttgttcattgaccccatcactagagct
gttggacttaccatgaatccacaccttttacaaggccatcttcccccttcacatgttaga
gctggagatgtttatgaagatgcacgcattataaggattgatgggagatccgggcttttg
cttgaggtttcttctagtcctattcatacacctgcgtatgtcaagacatccgatgcaact
gatgaggaaggttttaagttggagacgaaattcaaggaagggaatgtggttcgtgttcgt
gttcttgatttcagacagatggaagggttagccatatgtgctgttaaggcatctgcattt
gaagagtcttatttcacccatgctgatgtcaaacctggtatggtggtcaggggaaaggtc
attaagattgaagtggatgctgcggtaattcagtttttaggaggtttaaaggcactttgt
cctctccaacatatgtcagaacatagtcttgcaaagccccccaagaaatttaaggttggg
gtggatctagtattccgggtcctcggaggcaaatcaaagcgcattacggttacacataaa
agaactcttgttaaatcaaaacttagtattgttgcctcgtacattgatgctactgaaggc
atggttacacatggatggatcgcaaaaattgaaaaacatggatgccttgtgagattttat
aatggagttcaaggttttacccatatatctgagcttgggatcaatcaaagcgagattgac
tcttgttatcatgttggtcaagttgtaaagtgcagaatattaagtgctaaccctgcttct
cgaagaatcaacctcagctttaaaatgtcttctgaaaggagaattatggttgatattcct
gagttgggtagcattgtctctggagttgttgggcaattatctccttctgctattatagta
catgtgaatggaaaatcagatctaaaaggaaccattgcaatggaacacttagctgatcac
cttagccatggcagtcgactgaaggctctcataaaacctggatatgaattcaagaagctt
cttgttttagataaggactcaaagagaatgcttctttccgcaaagcgttccctgatttca
tctgctgatcaaattccatctgacatctctcaagttcaatctggttctgtcatacatggc
tacatttgcaatgtaattgagaatggttgctttgtccgctatcttggtcacatgactgga
tttgcttcgaaaaagaatgcacttgatgaccatggtggcagcgtgactgaatgcttttgc
attggacaatcagttcgaagtcatgttcttgaggttaatgctgaatctaggagagtaaaa
gtctcactgaaacaatcatcatgttattcatcagatgcatcattcatggaggaatacttt
catatggaggatgagattgcaatgctacaacagtcagaacctgaaggttctgatatgaag
tggatggattcttttgtggtgggaagcatggttgaggctgaagtgcaggggctaaaagaa
tttggtgtagttgtaagcttcaaaaaatatcctgatttagttgggtttatcacaaactat
caattagatggtaataatgtgggagttggctctactgtgaaagctttggttattgatatt
tcaaaggttgataacattgttgacctgtcattgaagcatagtttaattgaagaataccaa
agaaaagcatttgggcactcacgttccaagaaacgtccaagaggcctaggtaaggatgtt
atattcggtgacacagttaatgcagttgtggagttaatcaaagataattatttggttctt
tctttgcctgaacatggacatgctataggatatgcactttcaagtgattataacacacag
aaattttcacggaaaaaatatgttgaaggtgcaagggttgttgctacaattggcatgctt
ccaagtccaccatctggcaggctgctcttgctgctaaaatcattgagcgaacaagtgaaa
tgttcttcctctaagaaggatagaaaaagaactttgctttcggttggttcgattgttgga
gctgagattactgatataagagcttctgaaatacttacaaaattcagtcttggtcttcat
gggagaatatatatcacagaagtatgtgatcatgatgatcatcagccatttgacttaaat
ccatttagtaaatttagaattgggcaaacattgatggccaagattattgcaaaggcttca
aaacccaaggatactgcaaagagttatacctgggaactatctgttagaccttccgtgctt
tctggaaaggtggagacatctgatgagaactcacgtgaagattttgacttttctaatggc
caacatgtgattggttatgtcattaacgtcggtgatgaatgggctcgtttagcaatctcg
cggcttgtaaagggtgatttgtttgtactggatacttctactgatccctctgagcttcaa
gagtttcagaagcggtttagaccaggacagccattatcttgctacattctgagtataaac
aaagataagcgcaggttgcggttaggattaacagatgtggtcaggcagctggatgataaa
agaggtggatcagatatgaatcaggatttgtttgggcgtattcgagaaggcgatatcatt
ggtgggaagataactgaagtacttcctggtgttggaggtttggtcattcaaatcagtcct
catgtatttgggaaagtgcattttacagaagtcacagattcatgggtgtctaaccccata
gatggctacagtaaaggacagtttgtcagatgtagggtcttagaggttggacgttctgca
aatggagctttttatgttgatctttctttacgggattcctttatcaacagtcaggcaatt
aacttgggaggaggaactgttgatctctcctcctctaagcgctttacaaagtctgatgac
ttgtatcctaacatggaagtaaagggttacgtaaaagttgtaacggaaaagggatgcttc
attacactatcgcggaagattgatgcaaggatccttctgtctaatttatcggatgaatat
attgaagcccctgaaaaaggatttcctgttgggaaattagtacatggaagggtcctttct
gtggagccattgtccaagagggttgatgtatctttgagaacaaaactaccaagggtaaca
ccagatattaatattattgacatgcaaagttttaaggctggaaatatcatctctggcaag
ataaggagggttgaaccatatggtttattcatcacaattgaccataccaatacggttggt
ctgtgccatgtatctgaggttcctgatgaacatagagatagtctagaggccagatattgt
gcaggagagaaagttatggcaaaaattttgaagataaatgttgaacaaggcagagtatct
cttggaatgaagacttcttgcctaggtggccatcataccattacaccgaaagctaatggc
attggaaaaaagattgctgataatgctgcagctaatgatgtttctaatatctttatggaa
aagaatggcagtatgactgctgatgaagtggctgtagatgacaatgtaaccaatgatctg
ttgattccttctcaaatcaagtcaagggcttcggttctcccacttgaagtcacttttgat
gatgaggaacttggcttggggcatcaagtagttgactttgatgactccggcatcaccaaa
acagttgcagaaagctgtgcagctgaaaagagacgtttgaagagaaaagccaaagtagag
agagagcttcaaattaaggctgctgaggataagcttcttaatgaagatgcagctcctaca
agtgttgatgactttgaaaaactagttaggagctctcctaatagcagttacttatggatt
aagtacatggcttttatgctatcacttcgtgatgtcccaaaggctagatctgttgcagag
cgtgctttggcaacaataaacatgagagtggaaggagaaaagctgaacgtatggatcgca
tatctcaatttagagaatgaatatggcattcctcgcaaagaagctgttgagaagattttt
gagagggcatgccagtcttgtgattccaaaaagttgcatttggctttgttagggacatat
gaaagaactgggcaacaagagttggcaaatgagcttctaaatggaatgacaaagaaattc
cggacttcatgcaaggtctggttgagatatatagagaccctcttgaagcagggcaaaggt
gaagctcaggctgttgtaaatcgtgcaattttaagtcttggccagtggaagcacatcaaa
tttatctcgcaggctgctatgcttgaattcaagcatggtttacctgatagaggccgttca
atgtttgagaaaattttgagaacatatccaaagcgaattgacctgtggaatgtatatctt
gatcatgagatacgcttgaaagatcaagaactaatacgggcactgtttgagagagcaacc
agtttgagtcttcctccaaagaagatgaagtctctttttaagaagtacctttgctatgag
aaatcttgcggcgatgaagaacgggtagaatatgtgaagaggaaggccatggaatatgtt
gagagtgccactggtccttga
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