Nymphaea colorata (blue-petal water lily): 116254423
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Entry
116254423 CDS
T07418
Name
(RefSeq) RNA-binding protein BRN1-like isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncol03041
]
116254423
Spliceosome [BR:
ncol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116254423
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_occluded
BRAP2
RBD_DEAH11
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
116254423
NCBI-ProteinID:
XP_031485664
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All DBs
Position
5:22304425..22331860
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AA seq
400 aa
AA seq
DB search
MGDGGGGSDANAGESVKLFVGQVPKSMTEAQLLAMFREVALVDEVNIIKDKLSKASRGCC
FVICPSRQEADKAISACHNKRTLPGAASPLQVKYADGELERLEHKLFVGMLPKTVSEAEV
SDLFSKYGNIRDLQILRGSQQTSKGCAFLKYETKDQAISAIEALNGKHRMEGSTVPLVVK
WADTEKERQARRAQKAQSQSPNMQVSDSAHQASIFGAMPMGFIPPYNGYSYQAPGAFGLL
QYPLPAMQNQPGFHNIVPAVNQGAALRGLQYPIAYPGGVIGHTPLTSAPGSVSPAPVNNS
SSPNIKTSSTQVEGPPGANLFIYHIPQEFGDLELENAFQAFGRVLSTKVYVDKTTGASKC
FGFVSYDSPAAAQSAIKMMNGFQLSGKKLKVQLKRDNKQR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggaggaggcggatccgacgcgaacgcgggggaaagcgtgaagctcttcgtc
gggcaggtgccgaagagcatgacggaggcgcagcttctcgccatgttcagggaggtcgcg
ctcgtcgacgaggtcaatatcatcaaggataagctctccaaggcgtcgcgagggtgctgc
tttgtcatatgtccatcaaggcaagaggcagacaaggctattagtgcatgtcataacaag
cgaacgcttccaggggcggccagcccattgcaagtgaaatatgctgatggggaactagaa
agactagaacacaaactttttgttggaatgctcccaaagacggtttctgaagctgaagtt
tctgatctgttctcaaaatatggaaatatccgagatctacaaattctaaggggttctcaa
cagacaagcaaagggtgtgctttcttaaaatatgaaacaaaggatcaggcaatttcagct
atagaagctctcaatggaaagcacaggatggagggttctactgtgcctttagttgttaaa
tgggctgatactgaaaaagaaaggcaggcccgcagagctcaaaaagctcagagccaatct
cctaatatgcaagtatccgattcagcacatcaagcgtctatttttggggccatgcctatg
ggtttcattcctccttataatggatacagttatcaggcacctggagcttttgggcttttg
caatatcccttaccagcaatgcaaaatcaacctggctttcataatattgttccagccgtc
aatcaaggagctgcattacgtggtcttcagtatcctattgcatatcctggtggtgtaatt
ggtcacacacctttaaccagtgcacctggttcagtttcccctgcaccagttaataattct
tcctctccaaatatcaaaacaagctccacacaagtcgaaggtccccctggagccaatctt
tttatttatcacattcctcaagaatttggtgatctggagcttgaaaatgcttttcaggca
ttcggtcgggtactgagcactaaagtgtatgttgataagacaaccggtgcaagcaaatgc
tttggatttgttagttatgattcaccagctgctgcacaatctgcaatcaagatgatgaac
ggcttccaattgagtggtaagaagttgaaggtacagctaaagagagataacaagcaaaga
tga
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