Nymphaea colorata (blue-petal water lily): 116254454
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Entry
116254454 CDS
T07418
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116254454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116254454
03036 Chromosome and associated proteins [BR:
ncol03036
]
116254454
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116254454
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116254454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
116254454
NCBI-ProteinID:
XP_031485711
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All DBs
Position
5:10807997..10817338
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AA seq
978 aa
AA seq
DB search
MFGSSNPFGQSSSSPFGSPSVFGQSNNANSNPFAPKPFGSPTPFGSTSGSIFGSTATGVF
GATQPSSSAPAFGASSTPAFGSSAFGTTSSTPAFGSSLFGQKPAFGGFGSSSSQSSPFGG
AFQQSQPAFGSSLFGSPAPFGASSTPGFGATSTPAFGATSAPAFGATTTPSFGASSTPAF
GSASTSPFGSTGSAFGISSAPAFGSSTAPVFGASSTPAFGSASTPAFGSSSTPAFGASSA
PAFGASTTSFGFGSTPAFGQSASAFGSTPFGSTAFGAQSSPFGTQTAAPAFGSPGFGQPA
FGSQQGGSRVAPYSSTPEADGGISSTGQAPGKLESISAMPVYKDKSHEELRWEDYQKGDK
GGPNPAGQSSFGQPTQSSPFTTSAFGQTASNPFSSTTATGLFGSKPAAFGSAFGASSASS
FSSPFGSSSSSPFGATSSTPSIFGASSTPAFGGSSASPFGVSSSPAFGSSSPSLFNTTAG
ASAPTFGSTFGSTQSSGLFQSSSPSFGQPSIFGQTSSFGQNSSAFGQTNPFSTPSTGFGT
SLFAGSSTPSTGFGQTTPSLATGFQPAAQSSGAFSFGNFGQTPSAASSGFGGISSPFGQN
AFGQMPAPQSAAVIQPSPPVNPFGTLPAMPQVSIGRQGTAPSVQYGISSMPVVDKPPTAR
LSPLLISRHVSQRSRISLPSRKYHPKKDGQMVPFFSDDEEIPTTPKADALFIPRENPRAL
IINPLKQQNSSSLPKQSHLRDQPGTNENGKIIDDGSGPPPLEDDSTEYREKAAADASRHL
KGSEKQNGVHHEQHHEGNGYIPISGQRAGEAAIAFEYGAGIEALMPKLRHSDYYTEPSIQ
ELAARERAEPGNCKHVEDFVVGRRGYGSIKFFGETDVRRLDVESIVQFNNREVIVYMDGV
KKPPVGQGLNKPGEVTLLNVRCMDKKTGEVVTQGPLVEKYTKLLMKKAQDQGAEFVSFDA
VKGEWKFKVEHFSRYGLS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcttctaacccatttgggcagtcgtccagcagcccattcgggagcccgtct
gtgttcgggcaatcgaacaacgcgaacagcaacccttttgctccaaagcccttcggcagt
cctactccctttggctcgacgagcggctcgatcttcgggagcacagccacgggcgtcttt
ggtgctacacagccttcttcttcggcgccggcatttggtgcttcttccacgccagcattc
ggcagctccgcatttggcacgacttcgtccaccccagcatttgggtcatctttgtttggg
cagaaacctgcctttggaggatttggatcatcttctagtcaaagcagtccatttggtggt
gcatttcaacaatcacaaccagcatttggcagcagcttgtttggctcaccagcacctttt
ggggcatcaagtacaccgggctttggtgctacaagcactccagcatttggtgctacaagc
gctcctgcatttggtgcgaccaccactccatcttttggtgcttcaagcactcctgccttt
ggctccgcatcaaccagcccctttggtagcacaggcagcgcatttggtatttcaagtgca
cctgcttttggtagctctactgcacctgtattcggtgcttccagtacaccagcgtttggt
tctgcaagcacgcctgcctttggttcttcaagtacacctgcttttggagcttcttcagct
ccggcttttggtgcatcaactacttcttttggttttggctctacacctgcctttggtcaa
tcagcctctgcatttggcagtactccttttgggtccactgcttttggtgctcagagttca
ccttttgggacacaaacagcagcaccagcatttggaagcccagggtttggacagccagca
tttgggagccaacagggagggagcagagtagcaccatactcatccacccctgaagcggat
ggaggcattagcagcaccggacaggctcctggaaagctggaatcgatatctgccatgcct
gtgtataaggataaaagtcatgaggagttgagatgggaggattatcaaaagggagataaa
ggggggccaaatcctgctggccagtcaagctttggacaaccaacccagtcaagtcctttc
actacatcagcatttggccagacagcatcaaaccctttctctagtacgacagccacaggc
ttatttggttcaaaaccagcagcgtttggttctgcatttggtgcatcgtctgcttcctcc
tttagttcaccctttggttcatcctcttcaagtccttttggagctacatcttcaacgccc
tctatctttggggcatcatcaacacctgcatttgggggtagttctgcttccccatttggg
gtgtcaagttctcctgcatttgggtcatcttctccttcactttttaataccacagcagga
gcttcagctccgacatttggttcaacatttggaagtactcaatcatctgggctgttccag
tcttcttctccttcatttggccagccttccatctttggccagacatcttcctttggacag
aacagttctgcttttggccaaactaatccattcagtacaccatcaactggatttggaaca
agtttatttgctggcagttcaacaccatcaacgggatttggtcaaacaactccatcactt
gcaactggttttcagcctgctgctcagtcatctggggcattctcctttggtaactttggt
cagacaccgtctgctgcttcaagtggttttggagggatatcaagtccttttggtcagaat
gcctttggacaaatgcctgctcctcagagtgctgcagttatacaaccgagtcctccagta
aacccttttgggacacttcctgcaatgcctcaggtttctattggtcggcagggcactgct
ccttcagttcaatatggaatatcaagcatgccggttgttgataagccccctacagctagg
ttgtcccctttattgatttcaaggcatgtatctcaaagatcgaggatcagtttgccatcc
aggaaatatcatcctaaaaaggatggtcaaatggtgccattcttcagtgatgatgaagaa
attcctactacaccaaaggctgacgcactttttattccacgagaaaatccccgtgcgttg
atcattaatcctttaaaacagcagaactccagttcattaccaaagcaaagccatttgcgt
gaccaacctggtaccaatgaaaatggaaaaataattgatgatggatctggacctccacca
ttagaggatgattctacagaatatcgtgaaaaagctgcagctgatgcatcaagacatttg
aaaggttctgaaaaacagaatggggtccatcacgagcagcatcatgaggggaatgggtac
ataccaatatctggtcaaagagctggtgaggctgcgattgcttttgagtatggtgctggc
attgaagccctcatgccaaagctgcgtcattctgactactatactgagccaagtatccaa
gaacttgcagcaagggagagagctgaaccaggcaactgcaagcatgtggaggattttgtg
gttggacgccgtggctatgggagcatcaagttctttggagagacagatgttcggaggctc
gatgttgagagcattgttcagttcaacaaccgtgaggtgattgtgtatatggatggagtt
aagaagcctccagttggccaaggccttaacaagcccggggaggtaactctgctgaatgtc
cgatgcatggacaaaaaaacgggtgaagtagtgacgcaaggcccccttgtggagaagtat
acaaagttgctgatgaagaaagctcaggaccaaggcgcagagtttgtatcctttgatgct
gtcaagggtgaatggaagttcaaggtcgaacacttcagtcggtatggtctcagctag
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