Nymphaea colorata (blue-petal water lily): 116254537
Help
Entry
116254537 CDS
T07418
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116254537
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116254537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box_5
Motif
Other DBs
NCBI-GeneID:
116254537
NCBI-ProteinID:
XP_031485844
LinkDB
All DBs
Position
5:complement(25837554..25841827)
Genome browser
AA seq
644 aa
AA seq
DB search
MTKRIHFSGPPTVLSVLWDDLLLKILEKFDDKKSWRLVCKEFLKIEALSRKRIRILRPEI
LHRSIKSFPSLEHLDLSACSCLTNEMLSWVCSDHLRRVNLSRATGVDHRGLEFLVKQCPS
LEEIDLSYCSRLGDSEAAALSLAPNLKSVILVKCLKITDIGLVRIAVGCSKLLSLNLKWC
MEISDLGIELLAAKCKDLRFLDISYLSVTDKGLSSIACMKKLEVLVMVGCRMVDDDGLEC
LKRCSSHIQKVDVSRCINISSSGMMSLLEGNEKLQELGAAYCLDELTVPVLAKIIEFKNL
KTLRLDACVLFPSAIETISRNCRSLTEIGLSKCLGVTDDGINSLVKYCNELRILDVTCCH
QLTDAALHAIASSCKKLRCLKMESCSLFTGNGLEKIGTGCSFLQELDLTDCNIDDSALKH
ISRCTELQIIKLGLCLNISNEGIAYIGSNCKELRELDLYRCAGIGDDGLAALVTGCKNLK
RINICYCTEITDAGLKHIGSLDELWELEMRGLTRVTCLGMALMARGCTRLAQLDIKRCYA
INDLGIWALARHAINLRQVNISYCRISDGGLYLLFSELKCLQDVKMLHLTRVSLDGFELA
LRASESVKKVKMLDALKYLLSPDLIHMLQTRGCKFRWLNKPLLL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaggatacacttttctggacctcccactgttctctccgtcctgtgggacgat
cttctcctcaaaattctcgagaaattcgacgacaagaagtcatggaggttggtctgcaaa
gagtttctgaagatcgaagcattgtcaagaaaaaggatcaggatcttacggccggagata
ctgcacagatcgatcaaaagtttcccttctttggagcatctagatctctctgcctgttcg
tgtctgacgaatgagatgctatcatgggtttgcagtgatcacctgaggcgagtcaatctt
agcagggcaaccggagtcgatcacagggggcttgagtttcttgtcaagcagtgccccagt
ttggaagagatcgatctctcttactgctccagattgggcgattcggaagcagcagcgtta
tcgctggcgcctaacctcaagagcgtgatcttggtgaaatgcctgaagatcaccgacatc
ggcctggtgagaattgcagttggatgcagcaaattgctctcgttgaatctcaaatggtgt
atggagatctccgatctgggtattgaactcctagctgccaagtgcaaggatcttaggttt
ctcgacatttcttatctttcggtgacggataagggtctgagttcgattgcttgtatgaag
aaattggaggtgttagtcatggtaggttgcagaatggtggatgatgatggcctagaatgc
ctcaagcgctgtagctctcatattcagaaggttgacgtatcaaggtgcataaacatctca
tcttcaggcatgatgtcattgctggaggggaatgagaaattgcaggaacttggcgctgcc
tactgcctagatgagctcaccgttccagtgttggcaaagataattgagttcaagaacctg
aagacactcagattggatgcctgtgtgttgtttccatcagcaattgaaacaatcagcagg
aactgtcggagcctgacagagattggattgagcaaatgtctgggagtgacagatgacgga
atcaacagtctcgttaaatactgcaatgagttgagaattctcgatgttacttgctgccac
caactcactgacgctgctctccatgccattgcctcttcctgtaaaaaactcaggtgcctt
aagatggaatcctgcagtttgttcacaggtaacggtctagagaaaattggaactgggtgc
tccttcctccaagaacttgaccttaccgactgtaacatagatgattcagcactcaagcac
atttctagatgtacagaattgcagattataaagttaggcctctgtcttaatatttctaat
gaaggaatcgcctatattggttcaaactgcaaggagctgcgcgaactcgatctctatagg
tgtgcaggcattggcgacgatggtttagcagcattggtcacagggtgcaagaacctcaaa
agaatcaatatctgttattgtacagaaatcacagatgcgggattgaaacatattggcagt
ttggatgaactatgggagctggaaatgaggggactgacaagggtaacatgcctgggcatg
gctctgatggcgcgtggatgtaccaggctggcacagttggatatcaaaagatgttatgct
atcaacgacttgggcatttgggccttagctcgacatgccataaacctgaggcaggtaaat
atatcatattgtcggatatcagatgggggtttgtatctgctatttagtgagcttaaatgc
ttgcaagacgtgaagatgctgcaccttactcgtgtgtcacttgacgggtttgaacttgca
ttgcgagcatcagagagtgtgaagaaggttaaaatgttggatgctctaaagtacctgcta
tctcctgatctcattcacatgcttcagacccggggttgcaaatttcgctggttgaacaag
cctcttctgttgtaa
DBGET
integrated database retrieval system
