Nymphaea colorata (blue-petal water lily): 116254664
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Entry
116254664 CDS
T07418
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116254664
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116254664
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116254664
NCBI-ProteinID:
XP_031486057
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Position
5:complement(4415271..4420983)
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AA seq
396 aa
AA seq
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MGTVHGRPSGSRPPRQSRPAKFSAPVAPNGGSPTPAAEPGFHNHRPDHHHHHHQDHRPGP
GMTLPYSQVDASLRALAGQAEGFGRFAVGGLHGAVYHVTSLADDGCGSLREACRRKEPLW
IVFEISGIINLSSYLRVSSYKTIDGRGQRIKLTGKGLQLKECEHIIVCNLEFEGGRGPDV
DGIQIKPNSRHIWIDRCSLCDYDDGLIDITRASTDITISRCHFFRHDKTMLIGADPSHAF
DRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQILSQCNIYEG
GQKKLAFRYMTEKAVDKDVAQSGCIISEGDLFLSGAEPGLQATMDESSFFKASDMYPPCT
IEAPTDALKEVLKLCAGWQAVVRPEDTAVQDFAAQY
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggcacggtccatggtcgcccctcaggctcccgacctcctcgtcagtctcgaccggcc
aaatttagcgctccggttgcgcctaacggaggttccccgacgcccgcagctgaacctgga
tttcacaaccaccggccggaccaccaccaccaccatcatcaagatcaccgtccaggacca
ggcatgactctaccttattctcaagtggatgcgtccctgagggcgctcgctggtcaggct
gagggtttcggccgcttcgccgtcggcgggctccatggagctgtctaccatgtcacctcc
ctcgcggatgatggatgtggctcacttcgtgaggcatgccgaagaaaggaaccactatgg
attgtgttcgaaatttctggcataattaacctttcatcctacttgagagtgtcatcctat
aaaactattgatggccgtggccagaggataaaactaacgggcaagggtttgcaactaaaa
gaatgtgaacatatcatcgtttgcaatctggaatttgaaggtggaagagggccagatgtt
gatggtattcagataaagccgaattcaaggcatatatggatagatcgttgtagtttatgt
gactatgatgatggattaattgatatcacacgggcaagcacagatattacgatatcaaga
tgtcatttttttcgacatgataaaactatgcttattggagcagatcccagtcatgctttt
gataggtgtatccgggtgacgattcaccattgcttttttgatgggactcgtcaaagacat
cctcgtgttcgatttggaaaagttcatttatataataactacactagaaactggggcata
tatgcagtatgtgctagcgtagagtcacagattctttctcagtgcaatatttatgaagga
ggacagaagaagctggcttttagatatatgacagaaaaggcagtagacaaggatgtggca
caatctggctgcataatatctgaaggggatctgttcctgtcgggtgctgaacctggtctc
caagcaactatggacgagtcatctttcttcaaagccagtgacatgtacccaccatgcaca
attgaagcacccactgatgcattaaaagaggtcctcaaattgtgtgcaggatggcaagct
gtcgtgcgtccagaagatactgctgtgcaggactttgcagcccaatattaa
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