Nymphaea colorata (blue-petal water lily): 116254947
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Entry
116254947 CDS
T07418
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncol03036
]
116254947
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncol04812
]
116254947
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
116254947
Microtubules and associated factors
gamma-tubulin ring complex
116254947
Cytoskeleton proteins [BR:
ncol04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
116254947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD_LRWD1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
NBCH_WD40
SGL
Beta-prop_DCAF4
Beta-prop_DCAF12
WDR90_beta-prop_4th
PsbK
Motif
Other DBs
NCBI-GeneID:
116254947
NCBI-ProteinID:
XP_031486478
LinkDB
All DBs
Position
5:2107017..2117282
Genome browser
AA seq
838 aa
AA seq
DB search
MRGERGRKSCLVFEKGGKEEVGGVFRQAGVVAMAGGQTLVAACAGDTVKIFDTAVDCGDP
CTLQYSPSPGFSVNSVKWNHTNLVVASAGDDKKISLWRKNGQSLGTIQPSTSDIGDNIDE
SILSISFSNKSSRYVCTGGSAGVVRIWDLQRKRCIKWLRGHTGTITGAAYTCKDEHLASI
SVKGDLILHNLVSGARTAELKDPNGQVLRVLDYSRTSRHLLVTAGDDGSILLWDTNGRNR
KASWLKQHSAPTTGVCFSPTNDKIIATCGLDKKIYTFDTGSKRVSSVASFEAPFSSLAFK
DDGRILAAGTNGGSIVFYDVRGKLQPVNLLRAYNSSEAVTSICWQRSKPVLVNESNCTME
SALLGDCGEDSVLMPDPRPSSSAPASATAVGLRNSGRSASGSDTSSLPINSGVTMSASHP
STVEETPVRTRLGGALPWLQAVRTEYNLKDDMEVFSPLVDVQPITPSLSSWHDDRDDAKI
DYLLNDKKSSLLLPSTSSKRHAYTEGGEDIHTVLDVKSEVSYRQEDTSQSTVTPLATLHS
DQSHSATPPEDWGADGLSDMLSYRHRRSELASLNTLPTGSSAPGGKLPSNVQGLQDPASV
NLPSTGPNPHASFTAFQSQGKDISSRETASFPSEIPSSGVSTVSTAGPNLSKMVLGQANY
DLPSSLSLNLSRKNSYLERIIASRSSSAGATPTVGSPKLKKTGTETREELVNSLFSEATS
TAGSIPTTASATTVGNISTTSNGVHPHPPKNVTSADELHGTSPFSLQLVQHAIKETLGSL
NRSNHEDVRNLHIELLRQFHMLETRTTNLINTVLENQMEIMKKLETLQKENQQLRRLL
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgaggggagagagagggcggaaatcttgtttggtttttgaaaaaggggggaaggaggag
gtcggtggtgttttcaggcaggcgggagtggtggccatggccggtggccaaaccttagtg
gccgcgtgcgccggcgacacggtgaagatctttgataccgccgtcgactgcggcgatccc
tgcactctacagtactctccctccccgggcttctccgtcaactccgtcaaatggaaccat
accaatttagttgtggcaagtgctggagatgataagaaaatttcattatggagaaaaaat
ggacaaagtttgggtacaatacaaccttctaccagtgatattggagataacattgatgag
tcaatcctctctataagctttagcaacaaaagttctaggtatgtctgcactgggggtagc
gctggagttgttagaatatgggatttgcaaagaaaacggtgcatcaaatggttgaggggt
cacacaggtacaataacaggagctgcatacacttgcaaggatgaacatttggcatctatt
agcgtgaaaggggatctaattctccataatcttgtttccggtgcccggactgcagaactt
aaggatccaaatggacaggtattgagagtgcttgattattctcgaactagcaggcatctt
ttggtgacagcaggtgatgatggatccatacttttgtgggacacgaatggacgtaatagg
aaggcttcttggctgaagcagcattcagcacccactactggtgtttgcttctcaccaacg
aatgacaagataattgctacatgtggcttggataagaaaatatatacttttgacactggc
agtaaaagggtatcatctgttgcttcttttgaggcaccattctcatccttggcattcaaa
gatgatggtcggatcctggcagctggaacaaatggtggctccatagtattttatgatgtt
cgtgggaagctgcagcctgtcaatttgcttcgtgcttataacagttcagaggccgtcaca
agtatatgctggcagaggtctaagccagttctagtaaatgagagcaattgtaccatggag
tctgctcttctgggagactgtggagaagattcagttctcatgccagatccacgtccctcc
tcatctgctcctgcctctgcaactgctgttggtttgcgcaattctggacgttctgcttca
ggcagtgatacctcttctctacctattaacagtggggtaaccatgtctgcatcacatcct
tcaactgtagaagagactcctgtgaggactcgtctaggtggagctttaccatggctacaa
gcagtgcggactgaatacaatcttaaggatgatatggaagttttttctccgcttgtggat
gttcagccgattacaccatcactttccagctggcatgatgatcgtgatgatgcaaaaatt
gattacttgttaaatgataaaaaatcatcattgctgctgccctctacatcttccaaaaga
catgcttacactgagggtggagaagatatacatactgtattggatgtaaaatcagaggtc
tcatatagacaagaggatacttcacaatcaactgtgacacctttagcaactctgcatagt
gatcaatcacattctgccactcctcctgaagattggggagcagatggattatctgatatg
ctcagctatcgtcatcgacgatcagaacttgcttcattaaataccctaccaactgggtca
tcggcacctggcggaaagctgccttccaacgtccaaggtttgcaggatccagcttctgta
aacctgccttctacaggtcccaatccgcatgcaagcttcacagcttttcagtctcaggga
aaagatatctctagccgtgagacagcttccttcccttccgaaataccatcctctggtgtc
agtactgtctctacagcggggccaaacctttccaaaatggttttgggacaagcaaattat
gatttgcccagctccttgtcattgaatctgtcaagaaaaaattcgtatctagagaggata
attgctagccgttcttctagtgctggagctacgcctactgtgggttcgcccaaactgaaa
aagactggaacagaaacacgggaggagctggtgaacagtttgttctccgaggccacctcc
actgcagggagcattcctacgacagcaagtgccactactgtggggaatatctctacaaca
tcaaatggagtacacccacatccaccaaagaatgtgacttcggctgatgaactgcatggt
acctccccattctctcttcagcttgtccagcatgctattaaagagactcttggatctctg
aatagatcgaaccatgaagatgtgaggaaccttcatattgagctgctacggcaatttcat
atgctggagacaagaacaaccaacctgataaacactgttctggaaaatcaaatggagatc
atgaagaagttagaaacccttcaaaaagaaaaccagcagctacgtcggctactttaa
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