Nymphaea colorata (blue-petal water lily): 116254998
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Entry
116254998 CDS
T07418
Name
(RefSeq) vacuolar sorting protein 18
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116254998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116254998
Membrane trafficking [BR:
ncol04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116254998
Hops complex
116254998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_11
TPR_Vps41
zf_RING_Vps8
zf-RING_Vps41
Nup54_57_C
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116254998
NCBI-ProteinID:
XP_031486549
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All DBs
Position
1:complement(37963779..37990697)
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AA seq
992 aa
AA seq
DB search
MSSGRHIFSVDTLERYAAKGHGVITCMAAGNNVIVIGTSKGWLIRHDFGGLDSYDLDLSS
SRMGDQPVHSVFLDPGGSHCIATVLCTGGAETFYIHAKWRKPRILAKLKGLMVNAVAWNR
QQITEASTREVILGTDSGQLYEVFVDEKEKREKYLRSLYELSELQEPFMDLQMETTGTNN
ATRYYVMAVTPTRLYSFTGMGALDVVFSRYIDRAVHFMELPGEIPNSELHFFIKQRRAEH
FAWLSGAGIYYGGLNFGSQHSSSNGDENFVENKALLDYSKLGEVGEAIKPRSLAMTEFHF
LLLINNKVKVVNRISQLIIEELQFDHLLESAASGIIGLCSDATAGVYYAYDQNSIYEVSV
HDEGQDMWQVFLDMKDYTAALAHCRNSYQRDQVFLVQAEAAFSAKDFLRAASFYAKMNYI
LSFEEISLKFIGAGEQDALRAFLLWRLDNLPKEDKCQITLISTWASELYLDKINRLLLED
DAGVGSDTVEGVSSEYQTTVREFKAFLSDCKDVLDEATTVRLLESYGRVDELVYFASLKG
RYETVVHHYIQLGEARKALEVLQKPSVPVELQYKFSPDLIMLDAYETVEAWMTTNNLDPR
RLIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLQNEDPAVHNLLLALYAKQDDESALLRF
LQCKFGKGRTTGPDYCYDPKYALRLCLKERRMRSCIYIYGMMGMHEEAVALALRVDPELA
MAEADKVEDDEDLRKKLWLMVAKHVIEQEKGSKRENIRKAIAFLKETDGLLKIEDILPFF
PDFALIDDFKEAICSSLEDYNKQIELLKQEMNDATHGADNIRSDISALTQRYAVVGPDEE
CGGCGRKILIAGNSTRSRGYAPVGPLAPFYVFPCGHAFHAQCLIAHVTRCTDRTQAEYIL
DLQKRLTLSGNQGQKDAAGIVDDSTSIATSMSPLEKMRSQLDDAIASECPFCGDLMIREI
SLPFILPEEAESVASWEIKQQLGSQKSIPIAI
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgggaggcatatcttttcggtagacacgctcgaaaggtacgcggccaagggt
catggcgtaattacgtgtatggccgcagggaacaacgtcatcgtgatcgggacgagcaag
ggttggcttatcaggcatgatttcggaggcctagattcttacgatctggatctttcgtcc
agcagaatgggagatcaacctgtacacagtgtgttcctggatcctggtggcagtcattgt
atagcaactgtcctttgcactggaggagctgagacattctacatacatgcaaaatggcgc
aagcctcgaatccttgccaaactgaaggggctcatggttaatgctgttgcttggaacagg
caacagataacagaagcttctacaagggaagtgattcttgggactgacagcggtcaactt
tatgaggtttttgtggatgaaaaagagaagagggagaagtatctgaggtcgctttatgaa
ctttctgagcttcaagagccattcatggatctccagatggaaacaactggtacgaataat
gcaactagatactatgttatggctgttactcctaccaggctttattcgtttactggtatg
ggggctcttgatgtcgtatttagccgttacatagaccgagctgtgcattttatggagctt
cctggggagataccaaacagtgaacttcacttctttatcaagcaaaggagagctgaacat
tttgcttggctttctggggcaggaatttattatggaggcctgaattttggatcacagcac
agttcaagcaatggtgatgaaaattttgttgagaacaaggcccttttggactattcaaaa
ctgggggaagttggagaagccattaaaccaaggtccctcgcaatgacggaatttcatttt
ctgctccttatcaacaataaggttaaggttgttaataggattagccagctcataatagag
gaattgcagtttgaccatttactagagtcagcagcaagtgggattattgggttgtgcagt
gatgctactgctggagtatactatgcctatgatcaaaactctatatatgaggtttcagta
catgatgaaggtcaggatatgtggcaagtttttctggacatgaaggactacactgctgct
ttggcacactgtaggaattcataccaaagggatcaagtattcttggtacaggctgaagct
gctttttcagcaaaagattttttgagagcagcgtccttctatgccaagatgaattatatt
ttatcatttgaagaaatttctttgaagttcattggtgctggagaacaggatgctttaaga
gcctttttgttgtggcggcttgacaatctcccaaaggaagataaatgccaaattactctg
atttccacctgggcttctgagttgtacttggacaagatcaataggctattattggaggac
gatgcaggagttggcagtgacacagtagaaggtgtatcttctgagtaccaaactaccgta
agggaattcaaggctttccttagtgattgcaaagatgttttggatgaagctacaactgta
cggctattagagagctatggtagagtagatgaattggtctattttgctagtctgaagggg
cggtatgagactgtggttcatcattatatccagctaggggaagcaagaaaggccttggag
gtgctgcaaaaaccaagcgttcctgtggaactacagtacaaattttcaccagatctcata
atgcttgatgcatatgagactgttgaagcgtggatgacaacaaacaacttggatccaagg
agattgatcccagcaatgatgcgctattctagtgaaccacatgccaaaaatgaaacacat
gaagtcatcaagtatttagaattctgtgtccatcggttgcaaaatgaggatccagcagtg
cacaatttgttgcttgcattgtatgcaaagcaggatgatgaaagtgcattattgcggttt
cttcaatgcaaatttggtaaaggtcgaacaactgggcctgattactgttatgatcctaag
tatgcacttagactgtgcctcaaagagaggcgaatgcgttcatgcatttacatttatggc
atgatgggaatgcatgaagaagctgtggctcttgctttgagggtggatcctgagcttgca
atggcagaagcagataaggttgaagatgatgaggacttgaggaagaaactttggcttatg
gtagcaaagcatgtcatcgaacaggaaaagggatcgaaaagggagaacatacggaaagct
atagcatttctgaaggaaacggatggtcttctaaagatagaagacattttaccttttttc
cctgactttgctctcattgatgatttcaaagaggctatctgttcatcattagaggactac
aataagcaaatagaactgctgaagcaggagatgaatgatgcaacacatggtgctgataat
ataagaagtgatattagtgcccttactcagagatatgctgtcgtcggtcctgatgaagag
tgtgggggatgtgggcgcaagattttgatagcaggaaattcaacaagatcaaggggttat
gcacctgttgggccattggcaccgttttatgtctttccttgtggtcatgccttccatgca
caatgcctcattgctcatgtcaccagatgcactgaccgcacacaggcagaatatattcta
gatttacagaagaggctcactctctcgggtaaccaagggcagaaggatgctgctggtata
gttgatgactccacgtccattgctactagcatgagccctttagaaaagatgcggtcccaa
ctagatgatgccatagctagcgagtgccctttctgcggtgatttgatgattagagagatc
tcgctgccttttattcttcctgaggaggcagagtcagtggcatcatgggagattaagcag
cagctaggaagccagaaaagcatacctatagcaatctaa
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