Nymphaea colorata (blue-petal water lily): 116255050
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Entry
116255050 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116255050
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116255050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116255050
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116255050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Utp12
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_ACSF4
Beta-prop_EML
Beta-prop_VPS8
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_Vps41
PQQ_2
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
NBCH_WD40
WD40_2
UTP15_C
Beta-prop_NOL10_N
Utp21
DUF1513
Motif
Other DBs
NCBI-GeneID:
116255050
NCBI-ProteinID:
XP_031486642
LinkDB
All DBs
Position
5:26391064..26405075
Genome browser
AA seq
665 aa
AA seq
DB search
MGSRNLKDLLTSFSSSAEFLAICSGDGRIKIWDALKGQIQTEFSDITSTASDESNLYTQS
EKGHLSLDYRCMKWVTVYKEKKKKKHPTSLLVLGTGSGDVFAFDVSAGQLKWRVNDCHPG
GVNAISFSSHNSCLYTAGADGMVCQLDSSTGGLLERFRSSKRAVSSIAVSSDGNVLATAA
SQIKVFSCLDYRKTQKFSGHPVSVRCMIFSEDSKYIVSSGVGERYVALWKSEGQKEKSAC
CVLSMDHPSICLDMKGNDLDGLSVLAISEVGVCWLWCGRNVKELQSTIPTKVSVSSSVPE
ASVLKGQSGSAPAVIAAKLNNSADIETMSVFAAYGSFVRPSFEKILMKRGTDVNLHATID
GVFLPLGISKSVKKKMKHTEVTALDRANAEDAILPIPRLHGFTEKKRGRDKENLSLDLKQ
AAVIPDRDVRDEFESMDLKDRHGHLKEEGIPTNYMEEKLVSLGILNKSNEHNYDRKTYKR
ISKGLPFYSSELNEVQGYDNLFIHGAVPLKKIRAAITSMSSADAYKFLKFLTTMLRSRSC
SARHVFPWIHCILAVHGRHIIDEEPSHETLDNILEVTQYESSSVQSLLQLSGRLQLLMAQ
ISGSEASKDEVAAVPNHQSVDKNEGEDEDEDEDENGDDDEGEDVDIVQFMSSEDDKSPSD
TDVDM
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgcaatctgaaggatttgcttacttcattcagtagttcagcagagttcctt
gccatttgctctggagatggtcggattaagatttgggatgcactgaaaggccaaattcag
actgagttttctgacataacgtcaacagcaagcgatgagtccaacctatatactcaatca
gagaaaggtcatctttctcttgattacaggtgcatgaagtgggttactgtctacaaagag
aagaaaaagaagaagcatccaacttccttgttggttttagggactgggagtggtgatgtt
tttgcctttgatgtctctgctggtcagttgaagtggagggtcaatgattgccatcctggg
ggggtcaatgctatctctttttcaagtcataactcatgcttatacaccgccggtgctgat
ggcatggtctgccagcttgattctagtacaggaggtcttctggagagatttagatcttct
aaaagggctgtatcttctatagctgtttcgtcggatgggaatgtgttggccacagcagct
tctcagataaaggttttcagctgtttggattatagaaagacgcagaaattctctggccat
cctgtctctgttcgatgcatgatcttcagcgaagatagcaaatacattgtgtcttctggt
gttggtgaacgttacgtggcactctggaaaagtgagggacaaaaagagaaatctgcatgt
tgtgttctttcaatggaccatccttctatctgcttggacatgaagggtaatgatcttgac
ggtttatcagttttggcaatatctgaggttggagtttgctggctatggtgtggaaggaat
gttaaagaactgcagagtacaatacctacaaaggtttcagtatcatcatctgtccctgaa
gcttcggttttgaagggccagagtggcagtgcacctgctgtaattgctgcaaaattaaat
aacagtgcagatatagaaacaatgtcagtttttgctgcctatggttcgtttgtcaggccc
tcatttgagaaaattttgatgaaacgtggtacagatgtaaacttgcatgccaccattgat
ggagtctttctgcctcttggtatctccaagtctgttaagaaaaagatgaaacacactgag
gttactgctttggaccgtgcaaatgctgaagatgccattcttccaattccaaggcttcat
ggttttactgagaaaaaaagagggcgtgacaaagagaatttgtcgcttgatctcaagcaa
gcagctgttattcctgatcgtgatgtcagagatgaatttgaatctatggatctcaaagat
aggcatgggcatctgaaagaggagggtataccgacaaattacatggaggaaaaactcgta
tctctaggcattcttaataaaagcaatgagcataactatgacaggaaaacgtataaaaga
atttccaagggccttcctttctattcatccgaactaaatgaagttcaaggctatgacaac
ttatttattcatggtgccgtgccattaaagaagataagggcagcaatcacatcaatgagc
tctgctgatgcatacaaatttcttaaattcttgaccactatgttgagatcgaggtcatgc
agtgcgaggcatgttttcccatggatacattgtatcttggctgttcatggtagacatatt
atagacgaggagccatcacatgaaacacttgacaacattctcgaggtgacacagtacgaa
agttcgtcagtccagtctttgttacaactatctggtcgactgcagctattgatggctcag
atatctggcagtgaggccagcaaggatgaagttgcagcggtgccaaatcatcagtcagta
gacaaaaatgaaggggaggatgaggatgaggatgaggatgagaatggagatgatgacgaa
ggtgaagatgttgatatagttcaattcatgtcttctgaagatgacaaatctccaagcgat
actgatgttgatatgtag
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